Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RPS15AP29-201ENST00000445539 400 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL391497.1-201ENST00000608671 547 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC009237.17-201ENST00000618111 748 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 ZNF602P-201ENST00000405929 924 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 DBIP2-201ENST00000419076 262 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC234781.4-201ENST00000419384 244 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MRPS33P4-201ENST00000434892 317 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RNU4-29P-201ENST00000515943 174 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC027281.1-201ENST00000574178 758 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MIR423-201ENST00000362201 94 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL138878.1-201ENST00000405131 347 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RNA5SP80-201ENST00000410475 111 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RNA5SP293-201ENST00000410527 113 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MIR5186-201ENST00000577504 120 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 OR1AB1P-201ENST00000585564 761 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC010740.1-201ENST00000417035 684 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RPL27AP5-201ENST00000469428 449 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RPS17P11-201ENST00000474297 293 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC008489.1-201ENST00000524271 483 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MIR4672-201ENST00000583126 81 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AP004289.2-201ENST00000444413 1457 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC093698.1-201ENST00000423843 571 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC096638.2-201ENST00000434965 711 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 HMGN1P11-201ENST00000508668 303 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 RNU2-27P-201ENST00000516185 142 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 snoU109.6-201ENST00000516831 118 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL157394.1-201ENST00000562983 1224 ntBASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC1.05□□□□□ -2.24
SYNE1Q8NF91 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 FTLP6-201ENST00000355274 422 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC109925.1-201ENST00000478069 331 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 DUXAP6-201ENST00000553858 601 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 MIR4738-201ENST00000579134 87 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC087241.4-201ENST00000612441 480 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AL357552.1-201ENST00000445254 415 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC091544.1-201ENST00000484702 348 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 PHBP14-201ENST00000512887 367 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 GNRHR2P1-201ENST00000555315 631 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 LARP7P3-201ENST00000579888 337 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 RNVU1-4-201ENST00000612985 164 ntBASIC1.04□□□□□ -2.24
SYNE1Q8NF91 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.04□□□□□ -2.24
SYNE1Q8NF91 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms