Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC006349.1-201ENST00000555526 235 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC093519.1-201ENST00000566109 298 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC069545.1-201ENST00000605671 358 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC068276.1-201ENST00000605793 379 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 TUG1_1.1-201ENST00000610654 145 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC104985.2-201ENST00000620598 500 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AP002505.2-201ENST00000623585 696 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC073869.10-201ENST00000642016 354 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 AC131971.1-201ENST00000332881 1482 ntBASIC4.88□□□□□ -1.63
SIMC1Q8NDZ2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC023421.1-201ENST00000590535 1785 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 RNU6-1066P-201ENST00000363573 105 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 RN7SKP103-201ENST00000363848 320 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 RNA5SP90-201ENST00000364801 99 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 SNORA67-201ENST00000384423 137 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 DUTP5-201ENST00000406790 469 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL139098.1-201ENST00000407291 389 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 TPT1P2-201ENST00000413105 503 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 OR2AH1P-201ENST00000425717 928 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 FABP7P2-201ENST00000429946 379 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC010881.1-201ENST00000433830 235 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC098614.3-201ENST00000438957 440 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 EEF1E1P1-201ENST00000446998 430 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 MTCO2P25-201ENST00000447065 681 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL031584.1-201ENST00000447169 754 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL592447.1-201ENST00000447592 540 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC004924.1-201ENST00000480160 781 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC079841.1-201ENST00000481228 950 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 RPSAP50-201ENST00000481955 852 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 FCF1P3-201ENST00000496394 590 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 RPS4XP20-201ENST00000505751 772 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC093281.2-201ENST00000510153 597 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 KRT19P6-201ENST00000510983 209 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 RNU6-718P-201ENST00000516166 105 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 RN7SKP66-201ENST00000516681 231 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 ARL2BPP5-201ENST00000523141 481 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL390838.2-201ENST00000602394 274 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC233280.2-201ENST00000603917 1070 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC115621.1-201ENST00000604653 858 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC010857.1-201ENST00000606398 594 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AL354760.1-201ENST00000608357 643 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC023158.2-201ENST00000614876 543 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 MIR7844-201ENST00000616161 122 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 U4.5-201ENST00000617137 123 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC072046.2-201ENST00000618366 268 ntBASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIMC1Q8NDZ2 AC099063.3-201ENST00000642066 185 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms