Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.9□□□□□ -1.62
VPS8Q8N3P4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.9□□□□□ -1.62
VPS8Q8N3P4 AL451049.1-201ENST00000608672 497 ntBASIC4.9□□□□□ -1.62
VPS8Q8N3P4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.9□□□□□ -1.62
VPS8Q8N3P4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VPS8Q8N3P4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS8Q8N3P4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS8Q8N3P4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS8Q8N3P4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 FABP5P12-201ENST00000515543 389 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 PSMA2P1-201ENST00000526365 646 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 RPL7P26-201ENST00000333817 754 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 RN7SKP285-201ENST00000410137 318 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AC108734.1-201ENST00000439549 399 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AC117440.1-201ENST00000474107 571 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AL137843.1-201ENST00000605078 385 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS8Q8N3P4 ATP5A1P2-202ENST00000616464 443 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 AC099506.2-201ENST00000623074 221 ntBASIC4.89□□□□□ -1.63
VPS8Q8N3P4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AMD1P2-201ENST00000412936 992 ntBASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AC133473.1-201ENST00000455173 299 ntBASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 BNIP3P11-201ENST00000603878 563 ntBASIC4.88□□□□□ -1.63
VPS8Q8N3P4 AL513477.2-201ENST00000607858 568 ntBASIC4.88□□□□□ -1.63
VPS8Q8N3P4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS8Q8N3P4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS8Q8N3P4 FAR1P1-201ENST00000427163 934 ntBASIC4.87□□□□□ -1.63
VPS8Q8N3P4 AL591623.2-201ENST00000449978 222 ntBASIC4.87□□□□□ -1.63
VPS8Q8N3P4 AL136126.1-201ENST00000473603 402 ntBASIC4.87□□□□□ -1.63
VPS8Q8N3P4 MTND6P6-201ENST00000478031 263 ntBASIC4.87□□□□□ -1.63
VPS8Q8N3P4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS8Q8N3P4 AC080014.1-201ENST00000496877 1201 ntBASIC4.87□□□□□ -1.63
VPS8Q8N3P4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS8Q8N3P4 IGHV3-32-201ENST00000519182 355 ntBASIC4.87□□□□□ -1.63
VPS8Q8N3P4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS8Q8N3P4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS8Q8N3P4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS8Q8N3P4 AC116158.1-201ENST00000560231 2129 ntBASIC4.86□□□□□ -1.63
VPS8Q8N3P4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AC093698.1-201ENST00000423843 571 ntBASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AL139132.1-201ENST00000431587 344 ntBASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 RPL6P9-201ENST00000466502 859 ntBASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 MTCO1P46-201ENST00000451639 1491 ntBASIC4.86□□□□□ -1.63
VPS8Q8N3P4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS8Q8N3P4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 SNORD56.3-201ENST00000363507 71 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 SNORA44-201ENST00000384584 132 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 AL122016.1-201ENST00000403365 367 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 NANOGNBP1-201ENST00000448444 480 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 SNORA59A-201ENST00000459326 152 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 CYCSP20-201ENST00000473154 315 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 RPS29P26-201ENST00000477483 171 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 OR5H3P-201ENST00000502817 919 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 SAGE4P-201ENST00000442271 3381 ntBASIC4.85□□□□□ -1.63
VPS8Q8N3P4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS8Q8N3P4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS8Q8N3P4 OR1S2-201ENST00000302592 978 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms