Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RN7SKP283-201ENST00000517197 270 ntBASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC091516.1-201ENST00000549191 703 ntBASIC3.51□□□□□ -1.85
SKA3Q8IX90 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.51□□□□□ -1.85
SKA3Q8IX90 ABI1P1-201ENST00000603375 1120 ntBASIC3.51□□□□□ -1.85
SKA3Q8IX90 AP000255.1-201ENST00000610276 676 ntBASIC3.51□□□□□ -1.85
SKA3Q8IX90 AP000943.4-201ENST00000622912 357 ntBASIC3.51□□□□□ -1.85
SKA3Q8IX90 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SKA3Q8IX90 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SKA3Q8IX90 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SKA3Q8IX90 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SKA3Q8IX90 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SKA3Q8IX90 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 AL136520.1-201ENST00000600311 1322 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC104446.1-201ENST00000613728 1321 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SKA3Q8IX90 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SKA3Q8IX90 ASNSP1-204ENST00000641977 1664 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 RNU1-18P-201ENST00000363062 164 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SKA3Q8IX90 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SKA3Q8IX90 RNU1-13P-201ENST00000384499 162 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AL691449.1-201ENST00000426570 421 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 FO393414.1-201ENST00000428697 1184 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 TBCAP1-201ENST00000436520 327 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 MTCO3P20-201ENST00000454926 688 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC010307.1-201ENST00000467206 836 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 TPT1P3-201ENST00000492841 512 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 RPL30P11-201ENST00000495304 339 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 RPL31P61-201ENST00000496160 376 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 RNU5A-7P-201ENST00000515979 116 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 OR4A2P-201ENST00000527276 913 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 OR4C2P-201ENST00000530855 1064 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 GNRHR2P1-201ENST00000555315 631 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 MIR5047-201ENST00000579212 100 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC069304.3-201ENST00000603938 1084 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AL049634.3-201ENST00000604968 457 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC128687.2-201ENST00000609657 566 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC018926.1-201ENST00000616335 435 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC078880.5-201ENST00000617845 421 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AC124312.6-202ENST00000623624 418 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 AP003400.6-201ENST00000624698 740 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SKA3Q8IX90 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 LINC00561-201ENST00000565815 2738 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 MFSD8-220ENST00000641243 1422 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SKA3Q8IX90 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SKA3Q8IX90 MAPK10-372ENST00000641954 3413 ntBASIC3.5□□□□□ -1.85
SKA3Q8IX90 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SKA3Q8IX90 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SKA3Q8IX90 SPRR2C-201ENST00000290702 219 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 RNU6-1339P-201ENST00000363574 91 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 RNA5SP399-201ENST00000364003 117 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 OR52E6-202ENST00000379946 954 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SKA3Q8IX90 RNU6-468P-201ENST00000384003 109 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SKA3Q8IX90 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 AC127526.1-201ENST00000417526 366 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SKA3Q8IX90 HIGD1AP4-201ENST00000430194 280 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 AC011742.1-201ENST00000431448 434 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 RPS26P30-201ENST00000443431 335 ntBASIC3.49□□□□□ -1.85
SKA3Q8IX90 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.49□□□□□ -1.85
SKA3Q8IX90 GXYLT1P1-201ENST00000446657 490 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms