Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 Y_RNA.38-201ENST00000362617 102 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 Y_RNA.372-201ENST00000365599 102 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 MT-TL1-201ENST00000386347 75 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AL109941.1-201ENST00000401925 229 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 RNA5SP296-201ENST00000410523 111 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC068533.2-201ENST00000411872 306 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AL009174.1-201ENST00000426577 416 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC244505.5-201ENST00000443639 207 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 BTF3P6-201ENST00000448054 499 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 ARPC3P2-201ENST00000457786 533 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 RPL23AP56-201ENST00000460778 453 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 LARP1BP2-201ENST00000486594 519 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 RN7SL97P-201ENST00000486780 299 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 RPL7P38-201ENST00000488396 739 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 MTCO2P30-201ENST00000503662 364 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 NDUFA5P12-201ENST00000503796 343 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 PTGES3P3-201ENST00000511479 482 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 BTF3P13-201ENST00000513224 490 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC027308.1-201ENST00000517993 110 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 RPL23AP53-201ENST00000521854 457 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 OR5AL2P-201ENST00000532185 920 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AL138976.2-201ENST00000563989 694 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC211433.2-201ENST00000608433 387 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC006840.1-201ENST00000623069 542 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC091905.4-201ENST00000623432 202 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 INTS6P1-201ENST00000504674 2530 ntBASIC4.82□□□□□ -1.64
VRK3Q8IV63 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.82□□□□□ -1.64
VRK3Q8IV63 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC131971.1-201ENST00000332881 1482 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC092111.2-201ENST00000611627 1414 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 RNU6-433P-201ENST00000363216 104 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 RNU5D-1-201ENST00000363299 116 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 Y_RNA.453-201ENST00000384223 109 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 SNORA51.8-201ENST00000384234 132 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 RNU6-185P-201ENST00000384421 107 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 RPS3AP23-201ENST00000401762 784 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AL589647.1-201ENST00000402485 466 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 Z97832.1-201ENST00000402490 328 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 CCNG1P1-201ENST00000406783 885 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC007738.1-201ENST00000413892 348 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 HMGB3P23-201ENST00000414981 585 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 OR2AM1P-201ENST00000422137 422 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 FTH1P16-201ENST00000435241 552 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AL022238.1-201ENST00000442557 355 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC239367.2-201ENST00000447309 705 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 PSMC1P13-201ENST00000458195 985 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AP000797.1-201ENST00000478870 387 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 COX6B1P2-201ENST00000489624 230 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms