Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 UBE2FP2-201ENST00000566646 462 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC015912.2-201ENST00000571053 181 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 MIR4330-201ENST00000579077 105 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC107982.3-201ENST00000584957 985 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC234771.5-201ENST00000600161 514 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 XIAPP1-201ENST00000603162 600 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AL391358.1-201ENST00000605342 190 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AL121932.1-201ENST00000605542 214 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC087385.3-201ENST00000620477 187 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC109454.4-201ENST00000623411 649 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC007256.1-201ENST00000392253 2765 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AP001148.1-201ENST00000624124 2359 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 AC068254.2-201ENST00000623938 3577 ntBASIC3.97□□□□□ -1.77
C11orf88Q6PI97 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C11orf88Q6PI97 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
C11orf88Q6PI97 LINC02471-203ENST00000641941 4752 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 RNU6-821P-201ENST00000390995 107 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 RNU6-1000P-201ENST00000391066 106 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC016769.3-201ENST00000396562 315 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 RPL31P1-201ENST00000398116 372 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 MIR298-201ENST00000401212 88 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 Y_RNA.625-201ENST00000411256 107 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AF186996.5-201ENST00000418098 904 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 UBTFL3-201ENST00000418934 1024 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 NIPA2P1-201ENST00000426223 976 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 HMGB3P5-201ENST00000428894 612 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 MTCO1P3-201ENST00000429327 192 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 MRPS18BP2-201ENST00000434310 759 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 PTGES3P1-201ENST00000439531 483 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL662791.1-201ENST00000441992 928 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 MTCYBP42-201ENST00000444653 1130 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL513533.1-201ENST00000453728 415 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 VN1R17P-201ENST00000472048 1090 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 UBTFL6-201ENST00000477929 1024 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC025164.1-201ENST00000496249 478 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC105233.1-201ENST00000498840 781 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 CAB39P1-201ENST00000502277 460 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 BOLA3P3-201ENST00000505182 232 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 RNU6-1028P-201ENST00000517164 93 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC090151.1-201ENST00000520784 730 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AP001189.2-201ENST00000527320 189 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC126177.3-201ENST00000551839 688 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 MIR3690-201ENST00000580266 75 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC073387.2-201ENST00000604797 784 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC128687.1-201ENST00000605304 619 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL138721.1-201ENST00000616756 179 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL138960.2-201ENST00000625145 535 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AC026634.1-201ENST00000634369 198 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 FAM91A3P-201ENST00000456826 2544 ntBASIC3.96□□□□□ -1.78
C11orf88Q6PI97 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.96□□□□□ -1.78
C11orf88Q6PI97 AL627171.1-201ENST00000618845 1308 ntBASIC3.95□□□□□ -1.78
C11orf88Q6PI97 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.95□□□□□ -1.78
C11orf88Q6PI97 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
C11orf88Q6PI97 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
C11orf88Q6PI97 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.95□□□□□ -1.78
C11orf88Q6PI97 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.95□□□□□ -1.78
C11orf88Q6PI97 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.95□□□□□ -1.78
C11orf88Q6PI97 AC099654.2-201ENST00000433031 1980 ntBASIC3.95□□□□□ -1.78
C11orf88Q6PI97 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.95□□□□□ -1.78
C11orf88Q6PI97 AC067945.1-201ENST00000342609 618 ntBASIC3.95□□□□□ -1.78
C11orf88Q6PI97 RHOT1P2-201ENST00000366423 333 ntBASIC3.95□□□□□ -1.78
C11orf88Q6PI97 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms