Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC060780.2-201ENST00000589047 198 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 AC013244.1-201ENST00000604279 193 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 AC090948.1-201ENST00000607464 549 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX4Q06945 AP001521.2-201ENST00000608772 546 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX4Q06945 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 AL158196.1-201ENST00000616786 434 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 AC068831.8-201ENST00000620171 435 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX4Q06945 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX4Q06945 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX4Q06945 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SOX4Q06945 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.93□□□□□ -1.46
SOX4Q06945 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX4Q06945 ERCC6-202ENST00000374127 1782 ntBASIC5.93□□□□□ -1.46
SOX4Q06945 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX4Q06945 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SOX4Q06945 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SOX4Q06945 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX4Q06945 AL118496.1-201ENST00000440201 1812 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 AL359922.3-201ENST00000624779 1670 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX4Q06945 MTND5P16-201ENST00000460269 1703 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX4Q06945 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 U3.2-201ENST00000362981 210 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 SNORA4.3-201ENST00000365564 137 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 RNU6-657P-201ENST00000383904 107 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 SNORA32.2-201ENST00000384049 122 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 RPL23AP32-201ENST00000395315 459 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 AL356967.1-201ENST00000406305 431 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 RN7SKP222-201ENST00000410651 315 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 RNF10P1-201ENST00000418589 369 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX4Q06945 PRUNEP1-201ENST00000425846 705 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX4Q06945 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX4Q06945 IPO7P1-201ENST00000442031 636 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 SBDSP1-204ENST00000453858 737 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC090142.1-201ENST00000465776 462 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.92□□□□□ -1.46
SOX4Q06945 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX4Q06945 RPS17P5-201ENST00000498293 408 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 SUMO2P4-201ENST00000504193 276 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC034159.1-201ENST00000513885 583 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 RNA5SP92-201ENST00000516437 110 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 RN7SKP283-201ENST00000517197 270 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.92□□□□□ -1.46
SOX4Q06945 ELOCP31-201ENST00000540463 467 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.92□□□□□ -1.46
SOX4Q06945 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX4Q06945 AC008638.3-201ENST00000603341 463 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX4Q06945 AL356274.1-201ENST00000617064 410 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 MIR6837-201ENST00000620884 64 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 AC099654.6-201ENST00000636487 512 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX4Q06945 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SOX4Q06945 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.92□□□□□ -1.46
SOX4Q06945 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX4Q06945 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX4Q06945 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SOX4Q06945 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX4Q06945 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX4Q06945 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX4Q06945 AL592429.1-201ENST00000403909 1473 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 AC123769.1-201ENST00000530992 3192 ntBASIC5.91□□□□□ -1.46
SOX4Q06945 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SOX4Q06945 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX4Q06945 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SOX4Q06945 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms