Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ARPC3P2-201ENST00000457786 533 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 RPS4XP13-201ENST00000483219 789 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC108064.1-201ENST00000513791 460 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC068657.1-201ENST00000520807 306 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 OR4A2P-201ENST00000527276 913 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC004024.1-201ENST00000549244 247 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC005951.1-201ENST00000576706 485 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 MIR4474-201ENST00000579189 78 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC053481.4-201ENST00000583164 216 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AL354798.1-201ENST00000622505 329 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC020763.5-201ENST00000623298 430 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC002546.1-201ENST00000588041 2504 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC117529.2-201ENST00000512159 2068 ntBASIC2.75□□□□□ -1.97
HIST1H1AQ02539 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HIST1H1AQ02539 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RPL32P23-201ENST00000397237 405 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AL583834.1-201ENST00000406943 343 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RNA5SP107-201ENST00000411358 122 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC126124.2-201ENST00000413542 321 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 OR2B8P-201ENST00000432841 938 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AL353705.1-201ENST00000433468 480 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 B3GNT2P1-201ENST00000434960 952 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RPS4XP2-201ENST00000458402 793 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC146507.1-201ENST00000468335 354 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RN7SL132P-201ENST00000478131 296 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 GAPDHP36-201ENST00000480688 918 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC006483.1-201ENST00000487308 313 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 CEACAMP10-202ENST00000495431 496 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 MTATP6P22-201ENST00000507369 598 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RNU2-27P-201ENST00000516185 142 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 SCARNA14-201ENST00000516903 136 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC087499.8-201ENST00000578406 226 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 BNIP3P38-201ENST00000601117 544 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC083809.1-201ENST00000615051 472 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC116563.2-201ENST00000624751 535 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC093908.1-201ENST00000623125 8092 ntBASIC2.74□□□□□ -1.97
HIST1H1AQ02539 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H1AQ02539 AC073073.2-201ENST00000609827 2578 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 RNA5SP383-201ENST00000362934 120 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 SNORA70.2-201ENST00000364506 135 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 RNA5SP31-201ENST00000411144 127 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC004022.2-201ENST00000413824 193 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 GLRXP1-201ENST00000423261 334 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 RPL7P46-201ENST00000425129 740 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H1AQ02539 RPS29P7-201ENST00000439662 171 ntBASIC2.73□□□□□ -1.97
HIST1H1AQ02539 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms