Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RAB9AP3-201ENST00000412737 573 ntBASIC4.09□□□□□ -1.75
PEX3P56589 HMGB3P31-201ENST00000413333 595 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.09□□□□□ -1.75
PEX3P56589 AC013410.2-201ENST00000422627 201 ntBASIC4.09□□□□□ -1.75
PEX3P56589 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.09□□□□□ -1.75
PEX3P56589 RPL7P4-203ENST00000430239 730 ntBASIC4.09□□□□□ -1.75
PEX3P56589 HSFY7P-201ENST00000432672 318 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.09□□□□□ -1.75
PEX3P56589 HSFY8P-201ENST00000437934 318 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AC092809.1-201ENST00000441469 474 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.09□□□□□ -1.75
PEX3P56589 AC044797.1-201ENST00000445744 679 ntBASIC4.09□□□□□ -1.75
PEX3P56589 RAB9AP1-201ENST00000449393 573 ntBASIC4.09□□□□□ -1.75
PEX3P56589 NDUFS5P3-201ENST00000450668 321 ntBASIC4.09□□□□□ -1.75
PEX3P56589 HSFY5P-201ENST00000453726 309 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AC005229.2-201ENST00000456995 399 ntBASIC4.09□□□□□ -1.75
PEX3P56589 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.09□□□□□ -1.75
PEX3P56589 RPL7P48-201ENST00000461513 746 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.09□□□□□ -1.75
PEX3P56589 AC022034.3-201ENST00000471393 478 ntBASIC4.09□□□□□ -1.75
PEX3P56589 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.09□□□□□ -1.75
PEX3P56589 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.09□□□□□ -1.75
PEX3P56589 AC068339.2-201ENST00000534395 618 ntBASIC4.09□□□□□ -1.75
PEX3P56589 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.09□□□□□ -1.75
PEX3P56589 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.09□□□□□ -1.75
PEX3P56589 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.09□□□□□ -1.75
PEX3P56589 BNIP3P31-201ENST00000604515 566 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AC018618.2-201ENST00000604770 446 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.09□□□□□ -1.75
PEX3P56589 AC144521.1-201ENST00000607148 956 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.09□□□□□ -1.75
PEX3P56589 MIR7973-1-201ENST00000614683 76 ntBASIC4.09□□□□□ -1.75
PEX3P56589 AL138955.1-201ENST00000622881 1040 ntBASIC4.09□□□□□ -1.75
PEX3P56589 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PEX3P56589 AC083899.2-201ENST00000423285 1376 ntBASIC4.09□□□□□ -1.75
PEX3P56589 GTF2H2B-203ENST00000508065 1432 ntBASIC4.09□□□□□ -1.75
PEX3P56589 ZNF285B-201ENST00000561698 1767 ntBASIC4.09□□□□□ -1.76
PEX3P56589 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PEX3P56589 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
PEX3P56589 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PEX3P56589 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PEX3P56589 RNU6-1257P-201ENST00000384625 110 ntBASIC4.08□□□□□ -1.76
PEX3P56589 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.08□□□□□ -1.76
PEX3P56589 AL035423.1-201ENST00000420331 213 ntBASIC4.08□□□□□ -1.76
PEX3P56589 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.08□□□□□ -1.76
PEX3P56589 USP12PY-201ENST00000427677 1064 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AL451142.2-201ENST00000429076 2090 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC018644.1-201ENST00000429934 551 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 MTCO1P43-201ENST00000431831 488 ntBASIC4.08□□□□□ -1.76
PEX3P56589 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 AC006994.1-201ENST00000438212 839 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AL645931.1-201ENST00000439737 410 ntBASIC4.08□□□□□ -1.76
PEX3P56589 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PEX3P56589 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.08□□□□□ -1.76
PEX3P56589 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.08□□□□□ -1.76
PEX3P56589 SNORA84-201ENST00000459229 133 ntBASIC4.08□□□□□ -1.76
PEX3P56589 RNU7-27P-201ENST00000459281 62 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 AC005912.1-201ENST00000495392 255 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC112518.2-201ENST00000508565 425 ntBASIC4.08□□□□□ -1.76
PEX3P56589 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.08□□□□□ -1.76
PEX3P56589 TRMT10BP1-201ENST00000519377 943 ntBASIC4.08□□□□□ -1.76
PEX3P56589 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.08□□□□□ -1.76
PEX3P56589 DEFB109D-201ENST00000529497 240 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 AC135001.1-201ENST00000544546 283 ntBASIC4.08□□□□□ -1.76
PEX3P56589 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PEX3P56589 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.08□□□□□ -1.76
PEX3P56589 HNRNPCP4-201ENST00000571636 900 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.08□□□□□ -1.76
PEX3P56589 AC022884.3-201ENST00000579571 248 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC012254.4-201ENST00000588843 273 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC006116.7-201ENST00000590141 756 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.08□□□□□ -1.76
PEX3P56589 AL163642.2-201ENST00000604722 1019 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.08□□□□□ -1.76
PEX3P56589 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.08□□□□□ -1.76
PEX3P56589 AL391834.1-201ENST00000609609 560 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC006213.4-201ENST00000616184 634 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC103858.2-201ENST00000621471 543 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC009229.4-201ENST00000623854 1947 ntBASIC4.08□□□□□ -1.76
PEX3P56589 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PEX3P56589 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PEX3P56589 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PEX3P56589 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PEX3P56589 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.07□□□□□ -1.76
PEX3P56589 AP001486.2-201ENST00000561652 5113 ntBASIC4.07□□□□□ -1.76
PEX3P56589 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.07□□□□□ -1.76
PEX3P56589 AL122126.1-201ENST00000546905 1318 ntBASIC4.07□□□□□ -1.76
PEX3P56589 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PEX3P56589 RNA5SP51-201ENST00000364750 119 ntBASIC4.07□□□□□ -1.76
PEX3P56589 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PEX3P56589 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.07□□□□□ -1.76
PEX3P56589 RNU6-1279P-201ENST00000383917 103 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms