Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 AC006378.2-201ENST00000623178 2476 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 RNVU1-3-201ENST00000364313 161 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 MTND4LP20-201ENST00000402379 270 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 MTATP6P27-201ENST00000416987 621 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 PSMA2P3-201ENST00000429685 675 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.63□□□□□ -1.67
SUMO3P55854 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC127537.2-201ENST00000439258 465 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 RPS29P9-201ENST00000440360 171 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AL138878.2-201ENST00000440581 1241 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 ATP5C1P1-201ENST00000441945 895 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 USP9YP29-201ENST00000445112 563 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AC002381.1-201ENST00000447049 280 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 RN7SL629P-201ENST00000489622 285 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC079140.3-201ENST00000511111 550 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AC025881.1-201ENST00000518851 512 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.63□□□□□ -1.67
SUMO3P55854 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.63□□□□□ -1.67
SUMO3P55854 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 COX6CP4-201ENST00000605798 228 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AL008729.2-201ENST00000606393 473 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AC010678.1-201ENST00000614118 713 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 AC138965.3-201ENST00000623875 498 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 AL356121.2-201ENST00000624715 780 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SUMO3P55854 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.63□□□□□ -1.67
SUMO3P55854 NUP58P1-201ENST00000502546 1738 ntBASIC4.63□□□□□ -1.67
SUMO3P55854 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SUMO3P55854 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.63□□□□□ -1.67
SUMO3P55854 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.63□□□□□ -1.67
SUMO3P55854 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SUMO3P55854 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SUMO3P55854 PABPC1P7-201ENST00000413177 1513 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
SUMO3P55854 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.62□□□□□ -1.67
SUMO3P55854 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SUMO3P55854 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SUMO3P55854 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SUMO3P55854 AL359893.1-201ENST00000447628 1580 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SUMO3P55854 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SUMO3P55854 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SUMO3P55854 AC011755.1-201ENST00000623763 2049 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SUMO3P55854 SNURFL-201ENST00000309296 343 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SUMO3P55854 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SUMO3P55854 OR5H15-201ENST00000383696 930 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 AL049697.2-201ENST00000403708 294 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 MTCYBP36-201ENST00000404146 440 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 AL663109.1-201ENST00000411498 844 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.62□□□□□ -1.67
SUMO3P55854 CDK8P2-201ENST00000415020 547 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.62□□□□□ -1.67
SUMO3P55854 AC109583.1-201ENST00000432156 268 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.62□□□□□ -1.67
SUMO3P55854 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.62□□□□□ -1.67
SUMO3P55854 MTND1P28-201ENST00000435623 950 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.62□□□□□ -1.67
SUMO3P55854 OR7E125P-201ENST00000443450 846 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 MRPL48P1-201ENST00000445390 636 ntBASIC4.62□□□□□ -1.67
SUMO3P55854 AC239367.2-201ENST00000447309 705 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms