Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 XPOTP1-201ENST00000443317 2398 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LIMK1P53667 RNA5SP119-201ENST00000362715 117 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 RNU6-353P-201ENST00000364266 108 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 RNU6-549P-201ENST00000384433 107 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 RNU6-298P-201ENST00000390888 96 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 MCTS2P-201ENST00000394552 546 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC108032.1-201ENST00000416706 207 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 KRR1P1-201ENST00000419430 803 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 AL035246.1-201ENST00000433554 1255 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 RPS29P7-201ENST00000439662 171 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 HMGB1P48-201ENST00000446155 598 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC010469.1-201ENST00000463864 576 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC104982.1-201ENST00000478775 574 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC078817.1-201ENST00000492623 435 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.32□□□□□ -1.72
LIMK1P53667 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 AC108145.1-201ENST00000503770 153 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 MTCO1P30-201ENST00000515244 580 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 RNU4-60P-201ENST00000517239 135 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC010376.1-201ENST00000522101 334 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 AC104417.1-201ENST00000523974 751 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.32□□□□□ -1.72
LIMK1P53667 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.32□□□□□ -1.72
LIMK1P53667 MTND6P33-201ENST00000571794 183 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 MIR4298-201ENST00000584380 73 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 AC079587.1-201ENST00000603846 277 ntBASIC4.32□□□□□ -1.72
LIMK1P53667 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LIMK1P53667 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.32□□□□□ -1.72
LIMK1P53667 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.32□□□□□ -1.72
LIMK1P53667 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIMK1P53667 AC032011.1-201ENST00000611703 1549 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LIMK1P53667 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.31□□□□□ -1.72
LIMK1P53667 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 ENSAP1-201ENST00000392855 326 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
LIMK1P53667 RSL24D1P1-201ENST00000404972 493 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 RPL21P65-201ENST00000406094 466 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.31□□□□□ -1.72
LIMK1P53667 RPS15AP40-201ENST00000419621 391 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 MTCYBP15-201ENST00000433123 1127 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 GOT2P5-201ENST00000433995 546 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.31□□□□□ -1.72
LIMK1P53667 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.31□□□□□ -1.72
LIMK1P53667 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 MTATP6P14-201ENST00000455189 673 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 RPS20P32-201ENST00000456044 356 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 NAP1L1P3-201ENST00000462291 880 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 RPL7P49-201ENST00000471402 708 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 RPL23AP65-201ENST00000475608 468 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC015724.1-201ENST00000478577 156 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 TMED11P-201ENST00000479478 690 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC119751.4-201ENST00000507498 357 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC008885.2-201ENST00000509506 930 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC093755.1-201ENST00000512950 1023 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC119751.1-201ENST00000513357 765 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 RN7SKP157-201ENST00000516174 282 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.31□□□□□ -1.72
LIMK1P53667 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.31□□□□□ -1.72
LIMK1P53667 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LIMK1P53667 AC006518.1-201ENST00000541449 943 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.31□□□□□ -1.72
LIMK1P53667 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.31□□□□□ -1.72
LIMK1P53667 TVP23BP1-201ENST00000557500 617 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 MTCO1P40-201ENST00000574371 625 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 AC006270.2-201ENST00000578523 652 ntBASIC4.31□□□□□ -1.72
LIMK1P53667 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms