Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 AC118282.2-201ENST00000508739 374 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.1□□□□□ -1.75
PDX1P52945 FTH1P21-201ENST00000512179 511 ntBASIC4.1□□□□□ -1.75
PDX1P52945 KCTD9P2-201ENST00000512203 1013 ntBASIC4.1□□□□□ -1.75
PDX1P52945 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.1□□□□□ -1.75
PDX1P52945 IGLV3-26-201ENST00000520756 302 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.1□□□□□ -1.75
PDX1P52945 DYNLL1P4-201ENST00000549314 266 ntBASIC4.1□□□□□ -1.75
PDX1P52945 OR4U1P-201ENST00000554958 912 ntBASIC4.1□□□□□ -1.75
PDX1P52945 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
PDX1P52945 RPL23AP97-201ENST00000568955 471 ntBASIC4.1□□□□□ -1.75
PDX1P52945 MIR4286-201ENST00000580651 93 ntBASIC4.1□□□□□ -1.75
PDX1P52945 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.1□□□□□ -1.75
PDX1P52945 BNIP3P38-201ENST00000601117 544 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC091488.1-201ENST00000604239 660 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AL592148.2-201ENST00000612210 372 ntBASIC4.1□□□□□ -1.75
PDX1P52945 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PDX1P52945 AC109454.4-201ENST00000623411 649 ntBASIC4.1□□□□□ -1.75
PDX1P52945 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 AC008013.2-202ENST00000637965 364 ntBASIC4.1□□□□□ -1.75
PDX1P52945 ZNF663P-202ENST00000641770 1131 ntBASIC4.1□□□□□ -1.75
PDX1P52945 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.1□□□□□ -1.75
PDX1P52945 AC099786.3-201ENST00000565735 1410 ntBASIC4.1□□□□□ -1.75
PDX1P52945 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.1□□□□□ -1.75
PDX1P52945 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PDX1P52945 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.1□□□□□ -1.75
PDX1P52945 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.1□□□□□ -1.75
PDX1P52945 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDX1P52945 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDX1P52945 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDX1P52945 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
PDX1P52945 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDX1P52945 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDX1P52945 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 MIR554-201ENST00000384874 96 ntBASIC4.09□□□□□ -1.75
PDX1P52945 SNORA40.2-201ENST00000390847 128 ntBASIC4.09□□□□□ -1.75
PDX1P52945 RN7SKP182-201ENST00000410772 298 ntBASIC4.09□□□□□ -1.75
PDX1P52945 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDX1P52945 PRELID3BP11-201ENST00000414230 479 ntBASIC4.09□□□□□ -1.75
PDX1P52945 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.09□□□□□ -1.75
PDX1P52945 OR4K6P-201ENST00000416478 897 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AL356320.2-201ENST00000417263 507 ntBASIC4.09□□□□□ -1.75
PDX1P52945 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDX1P52945 AL451062.2-201ENST00000427515 271 ntBASIC4.09□□□□□ -1.75
PDX1P52945 RPS29P7-201ENST00000439662 171 ntBASIC4.09□□□□□ -1.75
PDX1P52945 EEF1A1P39-201ENST00000440791 250 ntBASIC4.09□□□□□ -1.75
PDX1P52945 HMGB3P6-201ENST00000444896 598 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 AC073587.1-201ENST00000447093 876 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AL589880.1-201ENST00000448271 287 ntBASIC4.09□□□□□ -1.75
PDX1P52945 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.09□□□□□ -1.75
PDX1P52945 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 AC096992.1-201ENST00000459808 709 ntBASIC4.09□□□□□ -1.75
PDX1P52945 GAPDHP39-201ENST00000481866 979 ntBASIC4.09□□□□□ -1.75
PDX1P52945 RPS3AP6-201ENST00000484430 795 ntBASIC4.09□□□□□ -1.75
PDX1P52945 RPL30P11-201ENST00000495304 339 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.09□□□□□ -1.75
PDX1P52945 NDUFB4P12-201ENST00000513465 390 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AC008694.2-201ENST00000517591 306 ntBASIC4.09□□□□□ -1.75
PDX1P52945 OR4C2P-201ENST00000530855 1064 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDX1P52945 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.09□□□□□ -1.75
PDX1P52945 AC053481.4-201ENST00000583164 216 ntBASIC4.09□□□□□ -1.75
PDX1P52945 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.09□□□□□ -1.75
PDX1P52945 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 AC008687.2-201ENST00000597865 520 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AC133552.5-201ENST00000604266 540 ntBASIC4.09□□□□□ -1.75
PDX1P52945 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.09□□□□□ -1.75
PDX1P52945 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.09□□□□□ -1.75
PDX1P52945 AC010608.2-201ENST00000624830 470 ntBASIC4.09□□□□□ -1.75
PDX1P52945 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.09□□□□□ -1.75
PDX1P52945 LINC02211-204ENST00000642024 1070 ntBASIC4.09□□□□□ -1.75
PDX1P52945 DCAF13P3-201ENST00000561147 1334 ntBASIC4.09□□□□□ -1.75
PDX1P52945 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDX1P52945 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDX1P52945 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDX1P52945 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PDX1P52945 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.76
PDX1P52945 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.09□□□□□ -1.76
PDX1P52945 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PDX1P52945 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.09□□□□□ -1.76
PDX1P52945 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.08□□□□□ -1.76
PDX1P52945 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.08□□□□□ -1.76
PDX1P52945 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 AC016716.1-201ENST00000265882 708 ntBASIC4.08□□□□□ -1.76
PDX1P52945 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDX1P52945 RNU4-68P-201ENST00000364314 141 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms