Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRCA2P51587 ELOCP8-201ENST00000439309 332 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 ELOCP15-201ENST00000442090 332 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 AP000936.2-201ENST00000447151 681 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.38□□□□□ -1.87
BRCA2P51587 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.38□□□□□ -1.87
BRCA2P51587 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC3.38□□□□□ -1.87
BRCA2P51587 MAPK10-322ENST00000641485 4530 ntBASIC3.38□□□□□ -1.87
BRCA2P51587 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.38□□□□□ -1.87
BRCA2P51587 AL139415.2-201ENST00000431968 163 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.37□□□□□ -1.87
BRCA2P51587 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.37□□□□□ -1.87
BRCA2P51587 PRELID3BP8-201ENST00000604148 295 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 AC004972.1-201ENST00000623934 2209 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRCA2P51587 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.37□□□□□ -1.87
BRCA2P51587 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
BRCA2P51587 AL360182.1-201ENST00000397433 468 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.37□□□□□ -1.87
BRCA2P51587 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.37□□□□□ -1.87
BRCA2P51587 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRCA2P51587 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.37□□□□□ -1.87
BRCA2P51587 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
BRCA2P51587 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRCA2P51587 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.37□□□□□ -1.87
BRCA2P51587 NCOA4P2-201ENST00000340589 1813 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRCA2P51587 Y_RNA.4-201ENST00000362333 112 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.37□□□□□ -1.87
BRCA2P51587 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.37□□□□□ -1.87
BRCA2P51587 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 RPL23AP73-201ENST00000492507 471 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.37□□□□□ -1.87
BRCA2P51587 AC007566.2-201ENST00000603642 413 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 AL034351.1-201ENST00000605288 668 ntBASIC3.37□□□□□ -1.87
BRCA2P51587 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
BRCA2P51587 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.36□□□□□ -1.87
BRCA2P51587 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
BRCA2P51587 OR5BR1P-201ENST00000524992 1330 ntBASIC3.36□□□□□ -1.87
BRCA2P51587 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BRCA2P51587 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
BRCA2P51587 RNU6-851P-201ENST00000384565 107 ntBASIC3.36□□□□□ -1.87
BRCA2P51587 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
BRCA2P51587 AC112184.1-201ENST00000505179 312 ntBASIC3.36□□□□□ -1.87
BRCA2P51587 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.36□□□□□ -1.87
BRCA2P51587 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.36□□□□□ -1.87
BRCA2P51587 HSPA8P4-201ENST00000511877 1920 ntBASIC3.36□□□□□ -1.87
BRCA2P51587 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRCA2P51587 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRCA2P51587 OR51A3P-201ENST00000413596 924 ntBASIC3.36□□□□□ -1.87
BRCA2P51587 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
BRCA2P51587 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.36□□□□□ -1.87
BRCA2P51587 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.36□□□□□ -1.87
BRCA2P51587 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.36□□□□□ -1.87
BRCA2P51587 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.36□□□□□ -1.87
BRCA2P51587 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRCA2P51587 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.35□□□□□ -1.87
BRCA2P51587 RPL21P109-201ENST00000422213 475 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.35□□□□□ -1.87
BRCA2P51587 UBE2D3P1-201ENST00000436669 444 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 ELOCP23-201ENST00000452014 332 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.35□□□□□ -1.87
BRCA2P51587 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.35□□□□□ -1.87
BRCA2P51587 RNA5SP24-201ENST00000516478 95 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.35□□□□□ -1.87
BRCA2P51587 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
BRCA2P51587 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 AL356968.1-201ENST00000416622 474 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.35□□□□□ -1.87
BRCA2P51587 PLCE1P1-201ENST00000622094 305 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
BRCA2P51587 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.35□□□□□ -1.87
BRCA2P51587 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
BRCA2P51587 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRCA2P51587 AC108210.2-201ENST00000503681 201 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.35□□□□□ -1.87
BRCA2P51587 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.35□□□□□ -1.87
BRCA2P51587 AC007318.2-201ENST00000620999 243 ntBASIC3.35□□□□□ -1.87
BRCA2P51587 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.34□□□□□ -1.87
BRCA2P51587 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BRCA2P51587 SNORA3.2-201ENST00000408221 125 ntBASIC3.34□□□□□ -1.87
BRCA2P51587 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.34□□□□□ -1.87
BRCA2P51587 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.34□□□□□ -1.87
BRCA2P51587 AC018797.3-201ENST00000513388 1241 ntBASIC3.34□□□□□ -1.87
BRCA2P51587 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.34□□□□□ -1.87
BRCA2P51587 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.34□□□□□ -1.87
BRCA2P51587 AL354950.1-201ENST00000614150 568 ntBASIC3.34□□□□□ -1.87
BRCA2P51587 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.34□□□□□ -1.87
BRCA2P51587 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
BRCA2P51587 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
BRCA2P51587 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
BRCA2P51587 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.34□□□□□ -1.87
BRCA2P51587 USP9YP2-201ENST00000504503 1000 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms