Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CR383656.6-201ENST00000550518 394 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 SERPINE4P-201ENST00000554978 281 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN9P43378 MIR4330-201ENST00000579077 105 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 AC113403.1-201ENST00000604910 193 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AL360219.1-201ENST00000610230 366 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPN9P43378 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPN9P43378 AL021997.2-201ENST00000615674 271 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC121761.2-201ENST00000617300 689 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC009237.17-201ENST00000618111 748 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AC007546.1-201ENST00000619452 559 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 AP003072.4-201ENST00000624580 310 ntBASIC4.55□□□□□ -1.68
PTPN9P43378 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPN9P43378 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PTPN9P43378 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPN9P43378 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPN9P43378 AP000776.1-201ENST00000530032 1663 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN9P43378 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 AC025031.4-201ENST00000621248 3271 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PTPN9P43378 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
PTPN9P43378 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 AC091046.3-201ENST00000631455 1574 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PTPN9P43378 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 MIR331-201ENST00000362302 94 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPN9P43378 RNU6-146P-201ENST00000384602 108 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC097374.1-203ENST00000400783 485 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 RN7SKP216-201ENST00000411050 312 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN9P43378 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 AL139421.1-201ENST00000423010 169 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC233981.1-201ENST00000423224 461 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC073335.1-201ENST00000427776 363 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN9P43378 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN9P43378 AC239809.1-201ENST00000450470 217 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 ABCF2P2-201ENST00000450549 296 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN9P43378 ATG12P2-201ENST00000456830 416 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 snoU13.1-201ENST00000459157 104 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 RPL35AP15-201ENST00000468042 339 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 ACTG1P13-201ENST00000486987 1043 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.54□□□□□ -1.68
PTPN9P43378 IGLVIV-65-201ENST00000517313 360 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 MTND2P26-201ENST00000528255 1029 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 PHBP17-201ENST00000528576 541 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN9P43378 AC007834.2-201ENST00000536310 343 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 OSBPL9P5-201ENST00000542581 171 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 MTCYBP27-201ENST00000555160 670 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN9P43378 OR4K7P-201ENST00000580232 945 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 MIR5096-201ENST00000583713 70 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC110743.1-201ENST00000584870 478 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.54□□□□□ -1.68
PTPN9P43378 AL139344.1-201ENST00000605228 195 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 AC009318.3-201ENST00000616916 503 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC243756.2-201ENST00000618406 463 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC131159.1-201ENST00000621854 213 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC015908.5-201ENST00000623289 343 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AC019278.1-201ENST00000623516 479 ntBASIC4.54□□□□□ -1.68
PTPN9P43378 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.54□□□□□ -1.68
PTPN9P43378 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTPN9P43378 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN9P43378 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN9P43378 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN9P43378 AC027290.2-201ENST00000623210 18662 ntBASIC4.53□□□□□ -1.68
PTPN9P43378 AC017104.4-201ENST00000636283 1592 ntBASIC4.53□□□□□ -1.68
PTPN9P43378 EIF2AP4-201ENST00000424793 1781 ntBASIC4.53□□□□□ -1.68
PTPN9P43378 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN9P43378 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.53□□□□□ -1.68
PTPN9P43378 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPN9P43378 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN9P43378 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPN9P43378 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.53□□□□□ -1.68
PTPN9P43378 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms