Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 AC106871.1-201ENST00000568324 3102 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 SNORA7.2-201ENST00000364446 145 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.17□□□□□ -1.74
HNF4AP41235 RNU6-1226P-201ENST00000384317 107 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 MIR607-201ENST00000385241 96 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 SNORD66.1-201ENST00000391230 76 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 MTCO2P8-201ENST00000412213 658 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 TCEA1P2-201ENST00000420496 906 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.17□□□□□ -1.74
HNF4AP41235 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 CBX1P1-201ENST00000440184 427 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 RRM2P4-201ENST00000441721 562 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 RPL23AP24-201ENST00000458203 385 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 UBE2V1P12-201ENST00000503954 474 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 AC010476.1-201ENST00000519111 851 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 OR5D17P-201ENST00000531492 978 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 MTND1P24-201ENST00000552175 861 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.17□□□□□ -1.74
HNF4AP41235 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 MIR4277-201ENST00000578298 84 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 SNRPGP15-201ENST00000600149 222 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AC069431.2-201ENST00000604149 1099 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AC009948.4-201ENST00000604692 675 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AC113403.1-201ENST00000604910 193 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 AC124016.2-201ENST00000610058 665 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AC109809.1-201ENST00000619665 545 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.17□□□□□ -1.74
HNF4AP41235 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.17□□□□□ -1.74
HNF4AP41235 MIR4278-201ENST00000636094 69 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.17□□□□□ -1.74
HNF4AP41235 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 AL359893.1-201ENST00000447628 1580 ntBASIC4.17□□□□□ -1.74
HNF4AP41235 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.17□□□□□ -1.74
HNF4AP41235 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HNF4AP41235 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.17□□□□□ -1.74
HNF4AP41235 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HNF4AP41235 MTND5P31-201ENST00000419366 1374 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HNF4AP41235 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.16□□□□□ -1.74
HNF4AP41235 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.16□□□□□ -1.74
HNF4AP41235 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HNF4AP41235 SGO1P1-201ENST00000603525 1447 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HNF4AP41235 RNU6-335P-201ENST00000364563 113 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 RNU6-441P-201ENST00000384545 106 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 MIR16-1-201ENST00000385271 89 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AL583835.1-201ENST00000399570 407 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AL121972.1-201ENST00000402023 252 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HNF4AP41235 RNU2-37P-201ENST00000410695 177 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 RNA5SP39-201ENST00000411245 120 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AL161631.1-201ENST00000417933 486 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 AL512326.1-201ENST00000443050 721 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.16□□□□□ -1.74
HNF4AP41235 RPL7P32-201ENST00000457119 744 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.16□□□□□ -1.74
HNF4AP41235 snoU109.3-201ENST00000459477 145 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC079804.1-201ENST00000461922 436 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 NAP1L1P3-201ENST00000462291 880 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 AC104164.3-201ENST00000467363 1258 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 RPL21P18-201ENST00000469899 480 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 PRDX3P4-201ENST00000470828 747 ntBASIC4.16□□□□□ -1.74
HNF4AP41235 HMGB1P38-201ENST00000490557 577 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms