Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PHBP17-201ENST00000528576 541 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.45□□□□□ -1.7
HADHAP40939 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.45□□□□□ -1.7
HADHAP40939 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 AC069240.1-201ENST00000548774 375 ntBASIC4.45□□□□□ -1.7
HADHAP40939 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.45□□□□□ -1.7
HADHAP40939 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.45□□□□□ -1.7
HADHAP40939 MIR4697-201ENST00000582977 78 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.45□□□□□ -1.7
HADHAP40939 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.45□□□□□ -1.7
HADHAP40939 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.45□□□□□ -1.7
HADHAP40939 AC012020.1-201ENST00000624541 1728 ntBASIC4.45□□□□□ -1.7
HADHAP40939 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.45□□□□□ -1.7
HADHAP40939 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HADHAP40939 AP005901.5-201ENST00000545779 1796 ntBASIC4.45□□□□□ -1.7
HADHAP40939 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HADHAP40939 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HADHAP40939 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HADHAP40939 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 Z99496.1-201ENST00000469424 1477 ntBASIC4.44□□□□□ -1.7
HADHAP40939 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HADHAP40939 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HADHAP40939 Z98755.1-201ENST00000407015 1384 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
HADHAP40939 RNU6-251P-201ENST00000363235 104 ntBASIC4.44□□□□□ -1.7
HADHAP40939 RNU6-921P-201ENST00000384361 107 ntBASIC4.44□□□□□ -1.7
HADHAP40939 MIR649-201ENST00000384843 97 ntBASIC4.44□□□□□ -1.7
HADHAP40939 MIR153-1-201ENST00000384914 90 ntBASIC4.44□□□□□ -1.7
HADHAP40939 MIR3065-201ENST00000390137 79 ntBASIC4.44□□□□□ -1.7
HADHAP40939 RNU6-1300P-201ENST00000391046 108 ntBASIC4.44□□□□□ -1.7
HADHAP40939 RPL23AP48-201ENST00000406913 488 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.44□□□□□ -1.7
HADHAP40939 AC007435.1-201ENST00000421086 415 ntBASIC4.44□□□□□ -1.7
HADHAP40939 RBMY1KP-201ENST00000423480 476 ntBASIC4.44□□□□□ -1.7
HADHAP40939 HSFY1P1-201ENST00000423928 1178 ntBASIC4.44□□□□□ -1.7
HADHAP40939 RPL18P10-201ENST00000425606 538 ntBASIC4.44□□□□□ -1.7
HADHAP40939 HIGD1AP12-201ENST00000427832 281 ntBASIC4.44□□□□□ -1.7
HADHAP40939 C4BPAP2-201ENST00000428434 478 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 AL589880.1-201ENST00000448271 287 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC079776.3-201ENST00000450665 370 ntBASIC4.44□□□□□ -1.7
HADHAP40939 RPL37P6-202ENST00000464216 403 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC053481.1-201ENST00000467217 306 ntBASIC4.44□□□□□ -1.7
HADHAP40939 RN7SL385P-201ENST00000468873 276 ntBASIC4.44□□□□□ -1.7
HADHAP40939 MYL12AP1-201ENST00000518490 515 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC009643.1-201ENST00000532030 391 ntBASIC4.44□□□□□ -1.7
HADHAP40939 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.44□□□□□ -1.7
HADHAP40939 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.44□□□□□ -1.7
HADHAP40939 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.44□□□□□ -1.7
HADHAP40939 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.44□□□□□ -1.7
HADHAP40939 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.44□□□□□ -1.7
HADHAP40939 CYP4A43P-201ENST00000568156 121 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.44□□□□□ -1.7
HADHAP40939 MIR4715-201ENST00000584117 79 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AP001160.4-201ENST00000596971 382 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AL390838.2-201ENST00000602394 274 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AL035411.2-201ENST00000604022 421 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC115286.1-201ENST00000604298 434 ntBASIC4.44□□□□□ -1.7
HADHAP40939 AC020634.1-201ENST00000608701 549 ntBASIC4.44□□□□□ -1.7
HADHAP40939 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.44□□□□□ -1.7
HADHAP40939 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.44□□□□□ -1.7
HADHAP40939 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
HADHAP40939 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HADHAP40939 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HADHAP40939 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HADHAP40939 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HADHAP40939 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.44□□□□□ -1.7
HADHAP40939 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HADHAP40939 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HADHAP40939 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
HADHAP40939 RAD17P1-201ENST00000418130 2042 ntBASIC4.43□□□□□ -1.7
HADHAP40939 RNU1-85P-201ENST00000364127 164 ntBASIC4.43□□□□□ -1.7
HADHAP40939 SUGT1P1-201ENST00000379514 476 ntBASIC4.43□□□□□ -1.7
HADHAP40939 RNU6-356P-201ENST00000384140 107 ntBASIC4.43□□□□□ -1.7
HADHAP40939 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HADHAP40939 FCF1P2-201ENST00000415284 583 ntBASIC4.43□□□□□ -1.7
HADHAP40939 RPS23P10-201ENST00000416185 486 ntBASIC4.43□□□□□ -1.7
HADHAP40939 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.43□□□□□ -1.7
HADHAP40939 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.43□□□□□ -1.7
HADHAP40939 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.43□□□□□ -1.7
HADHAP40939 RPL7AP25-201ENST00000423357 805 ntBASIC4.43□□□□□ -1.7
HADHAP40939 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HADHAP40939 RPL23AP1-201ENST00000428990 471 ntBASIC4.43□□□□□ -1.7
HADHAP40939 PSMA2P3-201ENST00000429685 675 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC069285.2-201ENST00000440210 275 ntBASIC4.43□□□□□ -1.7
HADHAP40939 AC114495.1-201ENST00000441274 436 ntBASIC4.43□□□□□ -1.7
HADHAP40939 OR10R1P-201ENST00000441524 1141 ntBASIC4.43□□□□□ -1.7
HADHAP40939 RPL29P29-201ENST00000448725 423 ntBASIC4.43□□□□□ -1.7
HADHAP40939 ZNF886P-201ENST00000450781 723 ntBASIC4.43□□□□□ -1.7
HADHAP40939 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.43□□□□□ -1.7
HADHAP40939 AC133473.1-201ENST00000455173 299 ntBASIC4.43□□□□□ -1.7
HADHAP40939 RPS23P7-201ENST00000466210 444 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms