Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.07□□□□□ -1.76
BRCA1P38398 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.07□□□□□ -1.76
BRCA1P38398 AC005798.1-201ENST00000513715 387 ntBASIC4.07□□□□□ -1.76
BRCA1P38398 AP000859.1-201ENST00000525536 307 ntBASIC4.07□□□□□ -1.76
BRCA1P38398 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BRCA1P38398 AC026333.2-201ENST00000542164 106 ntBASIC4.07□□□□□ -1.76
BRCA1P38398 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.07□□□□□ -1.76
BRCA1P38398 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.07□□□□□ -1.76
BRCA1P38398 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.07□□□□□ -1.76
BRCA1P38398 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.07□□□□□ -1.76
BRCA1P38398 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BRCA1P38398 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
BRCA1P38398 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.06□□□□□ -1.76
BRCA1P38398 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
BRCA1P38398 NANOGP6-201ENST00000429190 847 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 RAB9AP5-201ENST00000437794 597 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 AC074367.1-201ENST00000438685 1125 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 RPL32P28-201ENST00000443577 397 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 RAB9AP2-201ENST00000443911 597 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 AC099063.2-201ENST00000446360 662 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 AC023598.1-201ENST00000472521 361 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 RNU1-41P-201ENST00000516161 162 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 RNU1-48P-201ENST00000516400 162 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.06□□□□□ -1.76
BRCA1P38398 AC136601.2-201ENST00000604356 474 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.06□□□□□ -1.76
BRCA1P38398 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.06□□□□□ -1.76
BRCA1P38398 AL359693.1-201ENST00000614959 2407 ntBASIC4.06□□□□□ -1.76
BRCA1P38398 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.06□□□□□ -1.76
BRCA1P38398 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BRCA1P38398 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.06□□□□□ -1.76
BRCA1P38398 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BRCA1P38398 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BRCA1P38398 RNA5SP235-201ENST00000365411 114 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 RNA5SP184-201ENST00000411071 108 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 AC002524.1-201ENST00000411687 547 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.05□□□□□ -1.76
BRCA1P38398 RPL21P109-201ENST00000422213 475 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 MTND4LP13-201ENST00000425022 298 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.05□□□□□ -1.76
BRCA1P38398 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCA1P38398 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.05□□□□□ -1.76
BRCA1P38398 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCA1P38398 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 DPRXP4-201ENST00000578053 568 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 AL137072.1-201ENST00000603444 466 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
BRCA1P38398 AC006946.3-201ENST00000609791 756 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 AL732372.2-225ENST00000642124 456 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
BRCA1P38398 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRCA1P38398 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.05□□□□□ -1.76
BRCA1P38398 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRCA1P38398 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
BRCA1P38398 BTBD10P1-201ENST00000549824 1352 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.05□□□□□ -1.76
BRCA1P38398 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRCA1P38398 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.05□□□□□ -1.76
BRCA1P38398 OR6C64P-201ENST00000419708 825 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 HMGB3P9-201ENST00000441799 583 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 AC107015.1-201ENST00000466902 747 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 RPL31P50-201ENST00000471002 296 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
BRCA1P38398 AP000926.3-201ENST00000497201 299 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.05□□□□□ -1.76
BRCA1P38398 AP001960.1-201ENST00000506494 658 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.05□□□□□ -1.76
BRCA1P38398 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.05□□□□□ -1.76
BRCA1P38398 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 AL390838.2-201ENST00000602394 274 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 ATP1B3P1-201ENST00000605365 821 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.05□□□□□ -1.76
BRCA1P38398 AC009237.17-201ENST00000618111 748 ntBASIC4.05□□□□□ -1.76
BRCA1P38398 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
BRCA1P38398 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
BRCA1P38398 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCA1P38398 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
BRCA1P38398 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA1P38398 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
BRCA1P38398 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA1P38398 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCA1P38398 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA1P38398 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA1P38398 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCA1P38398 SETP10-201ENST00000424368 814 ntBASIC4.04□□□□□ -1.76
BRCA1P38398 ANP32BP2-201ENST00000454525 545 ntBASIC4.04□□□□□ -1.76
BRCA1P38398 AC093755.1-201ENST00000512950 1023 ntBASIC4.04□□□□□ -1.76
BRCA1P38398 AC008489.1-201ENST00000524271 483 ntBASIC4.04□□□□□ -1.76
BRCA1P38398 AL121766.1-201ENST00000547436 487 ntBASIC4.04□□□□□ -1.76
BRCA1P38398 MIR4319-201ENST00000577285 85 ntBASIC4.04□□□□□ -1.76
BRCA1P38398 AL157817.1-201ENST00000614264 790 ntBASIC4.04□□□□□ -1.76
BRCA1P38398 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCA1P38398 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms