Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TRIM23P36406 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM23P36406 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM23P36406 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
TRIM23P36406 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM23P36406 ENSAP3-201ENST00000312710 333 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 MIR124-3-201ENST00000384866 87 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 SNORA11-201ENST00000408789 128 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AC092745.2-202ENST00000411880 369 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM23P36406 MTCO1P54-201ENST00000430139 712 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM23P36406 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM23P36406 AC122718.1-201ENST00000439448 744 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 CDC27P1-201ENST00000445384 715 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM23P36406 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM23P36406 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM23P36406 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM23P36406 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM23P36406 FAM133DP-201ENST00000464802 691 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AC015908.1-201ENST00000478739 476 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM23P36406 AC110792.2-201ENST00000510278 224 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 NPM1P41-201ENST00000512920 831 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM23P36406 HMGB1P23-201ENST00000518743 568 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AC083923.1-201ENST00000523708 376 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM23P36406 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM23P36406 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM23P36406 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM23P36406 AC141257.3-201ENST00000572906 215 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM23P36406 AC104662.1-201ENST00000604448 511 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AL451044.1-201ENST00000604867 238 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AL392112.1-201ENST00000605115 829 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 HMGB1P50-201ENST00000605814 607 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM23P36406 AC018926.1-201ENST00000616335 435 ntBASIC3.96□□□□□ -1.78
TRIM23P36406 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM23P36406 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRIM23P36406 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM23P36406 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM23P36406 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM23P36406 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM23P36406 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM23P36406 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM23P36406 AC138393.1-206ENST00000540997 1886 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM23P36406 RNU6-543P-201ENST00000362576 108 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 RNA5SP391-201ENST00000363456 119 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM23P36406 MIR134-201ENST00000385258 73 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM23P36406 AC025750.1-201ENST00000399891 379 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM23P36406 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM23P36406 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM23P36406 AC068135.1-201ENST00000446164 246 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM23P36406 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM23P36406 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM23P36406 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM23P36406 RPS3AP6-201ENST00000484430 795 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 RPS4XP15-201ENST00000489210 795 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM23P36406 AC017037.1-201ENST00000508460 471 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM23P36406 IGKV2-23-201ENST00000518729 323 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 NDUFA5P2-201ENST00000519723 344 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM23P36406 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM23P36406 ATP5F1P7-201ENST00000567330 760 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 AC120057.2-201ENST00000571520 271 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 AP000919.1-202ENST00000581139 1264 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 EIF1P6-201ENST00000600054 334 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM23P36406 AC020978.9-201ENST00000624380 1141 ntBASIC3.95□□□□□ -1.78
TRIM23P36406 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM23P36406 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM23P36406 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM23P36406 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM23P36406 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM23P36406 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM23P36406 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM23P36406 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRIM23P36406 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM23P36406 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM23P36406 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms