Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.51□□□□□ -1.85
RPA3P35244 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 AC117525.1-201ENST00000515228 503 ntBASIC3.51□□□□□ -1.85
RPA3P35244 FABP5P12-201ENST00000515543 389 ntBASIC3.51□□□□□ -1.85
RPA3P35244 RN7SKP18-201ENST00000516005 275 ntBASIC3.51□□□□□ -1.85
RPA3P35244 SNORA70.19-201ENST00000516717 90 ntBASIC3.51□□□□□ -1.85
RPA3P35244 PAICSP4-201ENST00000517543 1253 ntBASIC3.51□□□□□ -1.85
RPA3P35244 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.51□□□□□ -1.85
RPA3P35244 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.51□□□□□ -1.85
RPA3P35244 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.51□□□□□ -1.85
RPA3P35244 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.51□□□□□ -1.85
RPA3P35244 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.51□□□□□ -1.85
RPA3P35244 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.51□□□□□ -1.85
RPA3P35244 AC067852.4-201ENST00000590314 478 ntBASIC3.51□□□□□ -1.85
RPA3P35244 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 AL355816.1-201ENST00000607951 118 ntBASIC3.51□□□□□ -1.85
RPA3P35244 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.51□□□□□ -1.85
RPA3P35244 CR392039.5-201ENST00000623201 510 ntBASIC3.51□□□□□ -1.85
RPA3P35244 AC034229.5-201ENST00000624258 185 ntBASIC3.51□□□□□ -1.85
RPA3P35244 AC015726.3-201ENST00000624501 418 ntBASIC3.51□□□□□ -1.85
RPA3P35244 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.51□□□□□ -1.85
RPA3P35244 AC119674.1-207ENST00000641355 633 ntBASIC3.51□□□□□ -1.85
RPA3P35244 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RPA3P35244 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 AL139811.1-201ENST00000424779 2299 ntBASIC3.51□□□□□ -1.85
RPA3P35244 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.51□□□□□ -1.85
RPA3P35244 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 ZNF285B-201ENST00000561698 1767 ntBASIC3.51□□□□□ -1.85
RPA3P35244 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPA3P35244 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPA3P35244 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.5□□□□□ -1.85
RPA3P35244 AL161912.2-201ENST00000565707 3007 ntBASIC3.5□□□□□ -1.85
RPA3P35244 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RPA3P35244 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPA3P35244 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
RPA3P35244 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RPA3P35244 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RPA3P35244 RNA5SP124-201ENST00000362739 110 ntBASIC3.5□□□□□ -1.85
RPA3P35244 RNA5SP51-201ENST00000364750 119 ntBASIC3.5□□□□□ -1.85
RPA3P35244 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPA3P35244 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RPA3P35244 RN7SKP53-201ENST00000411337 315 ntBASIC3.5□□□□□ -1.85
RPA3P35244 RNA5SP107-201ENST00000411358 122 ntBASIC3.5□□□□□ -1.85
RPA3P35244 AC093578.1-201ENST00000415219 368 ntBASIC3.5□□□□□ -1.85
RPA3P35244 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.5□□□□□ -1.85
RPA3P35244 AL513174.1-201ENST00000423182 629 ntBASIC3.5□□□□□ -1.85
RPA3P35244 GTF2IP23-201ENST00000423746 351 ntBASIC3.5□□□□□ -1.85
RPA3P35244 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.5□□□□□ -1.85
RPA3P35244 AC007563.3-201ENST00000433233 371 ntBASIC3.5□□□□□ -1.85
RPA3P35244 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPA3P35244 ARL5AP3-201ENST00000439327 386 ntBASIC3.5□□□□□ -1.85
RPA3P35244 AL157827.1-201ENST00000447622 132 ntBASIC3.5□□□□□ -1.85
RPA3P35244 AL133547.1-201ENST00000448546 220 ntBASIC3.5□□□□□ -1.85
RPA3P35244 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.5□□□□□ -1.85
RPA3P35244 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RPA3P35244 TRBV8-2-201ENST00000475637 270 ntBASIC3.5□□□□□ -1.85
RPA3P35244 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.5□□□□□ -1.85
RPA3P35244 USP9YP5-201ENST00000511770 630 ntBASIC3.5□□□□□ -1.85
RPA3P35244 ACTR6P1-201ENST00000514311 1104 ntBASIC3.5□□□□□ -1.85
RPA3P35244 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.5□□□□□ -1.85
RPA3P35244 RNU1-95P-201ENST00000516357 160 ntBASIC3.5□□□□□ -1.85
RPA3P35244 RNU1-128P-201ENST00000516704 160 ntBASIC3.5□□□□□ -1.85
RPA3P35244 TRMT10BP1-201ENST00000519377 943 ntBASIC3.5□□□□□ -1.85
RPA3P35244 PDCL2P2-201ENST00000533651 189 ntBASIC3.5□□□□□ -1.85
RPA3P35244 OR4U1P-201ENST00000554958 912 ntBASIC3.5□□□□□ -1.85
RPA3P35244 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.5□□□□□ -1.85
RPA3P35244 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.5□□□□□ -1.85
RPA3P35244 AC034105.4-201ENST00000568304 277 ntBASIC3.5□□□□□ -1.85
RPA3P35244 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.5□□□□□ -1.85
RPA3P35244 AC083899.3-201ENST00000603413 594 ntBASIC3.5□□□□□ -1.85
RPA3P35244 AC010591.1-201ENST00000603941 649 ntBASIC3.5□□□□□ -1.85
RPA3P35244 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.5□□□□□ -1.85
RPA3P35244 AC069209.1-201ENST00000619282 651 ntBASIC3.5□□□□□ -1.85
RPA3P35244 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.5□□□□□ -1.85
RPA3P35244 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RPA3P35244 AC004972.1-201ENST00000623934 2209 ntBASIC3.5□□□□□ -1.85
RPA3P35244 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
RPA3P35244 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
RPA3P35244 AL118496.1-201ENST00000440201 1812 ntBASIC3.49□□□□□ -1.85
RPA3P35244 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RPA3P35244 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.49□□□□□ -1.85
RPA3P35244 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.49□□□□□ -1.85
RPA3P35244 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RPA3P35244 OTUD4P1-201ENST00000237841 3067 ntBASIC3.49□□□□□ -1.85
RPA3P35244 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.49□□□□□ -1.85
RPA3P35244 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RPA3P35244 U3.15-201ENST00000365398 212 ntBASIC3.49□□□□□ -1.85
RPA3P35244 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RPA3P35244 RNU6-891P-201ENST00000384280 111 ntBASIC3.49□□□□□ -1.85
RPA3P35244 RNA5SP498-201ENST00000411342 120 ntBASIC3.49□□□□□ -1.85
RPA3P35244 ATP5A1P2-201ENST00000412323 255 ntBASIC3.49□□□□□ -1.85
RPA3P35244 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.49□□□□□ -1.85
RPA3P35244 BTG3P1-201ENST00000435859 716 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms