Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 AL157392.4-201ENST00000609756 345 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC131238.1-201ENST00000617135 328 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HOXA13P31271 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA13P31271 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA13P31271 AL122126.1-201ENST00000546905 1318 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA13P31271 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXA13P31271 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA13P31271 OR1L1-202ENST00000373686 1083 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 GSTA8P-201ENST00000404253 637 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 HNRNPDP2-201ENST00000406475 478 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 RN7SKP27-201ENST00000410684 333 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 USP12PY-201ENST00000427677 1064 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXA13P31271 MTND1P26-201ENST00000440488 538 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXA13P31271 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXA13P31271 FABP3P2-201ENST00000453169 399 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 OR9M1P-201ENST00000459641 921 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXA13P31271 SAP18P1-201ENST00000512058 390 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 RNU1-45P-201ENST00000517191 141 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AC023632.4-201ENST00000517783 191 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXA13P31271 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 OR4A2P-201ENST00000527276 913 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXA13P31271 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.55□□□□□ -1.68
HOXA13P31271 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 AC091516.1-201ENST00000549191 703 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 HSPE1P5-201ENST00000561489 272 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.55□□□□□ -1.68
HOXA13P31271 AC005255.1-201ENST00000593748 216 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AC015726.1-201ENST00000602353 681 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AP000238.1-201ENST00000608759 426 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA13P31271 AL356863.1-201ENST00000623378 1080 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AC008785.1-201ENST00000624475 456 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA13P31271 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXA13P31271 CYP1D1P-201ENST00000416662 1433 ntBASIC4.55□□□□□ -1.68
HOXA13P31271 AC025263.3-201ENST00000622965 1396 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HOXA13P31271 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA13P31271 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA13P31271 AL512646.1-201ENST00000269395 1077 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 RNA5SP391-201ENST00000363456 119 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA13P31271 MTCO2P8-201ENST00000412213 658 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 AL450992.3-201ENST00000413192 568 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA13P31271 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA13P31271 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 GTF2IP3-201ENST00000433887 494 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA13P31271 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA13P31271 AC239367.2-201ENST00000447309 705 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA13P31271 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXA13P31271 PRDX3P4-201ENST00000470828 747 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 PPIAP15-201ENST00000479662 484 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
HOXA13P31271 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA13P31271 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA13P31271 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA13P31271 RN7SKP96-201ENST00000516948 297 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 NDUFA5P2-201ENST00000519723 344 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA13P31271 OR10V3P-201ENST00000525712 725 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 MED28P5-201ENST00000528254 438 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXA13P31271 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA13P31271 YPEL5P3-201ENST00000547227 352 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA13P31271 AC044913.1-201ENST00000557200 430 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXA13P31271 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXA13P31271 MTND6P33-201ENST00000571794 183 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 MIR5685-201ENST00000579080 79 ntBASIC4.54□□□□□ -1.68
HOXA13P31271 MIR4716-201ENST00000579628 84 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms