Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 MIR1254-2-201ENST00000579553 63 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.59□□□□□ -1.51
CNGA1P29973 WISP1-OT1-201ENST00000602893 642 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AL596327.1-201ENST00000603629 213 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.59□□□□□ -1.51
CNGA1P29973 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.59□□□□□ -1.51
CNGA1P29973 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.59□□□□□ -1.51
CNGA1P29973 AC018816.2-201ENST00000621460 353 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.59□□□□□ -1.51
CNGA1P29973 AC099063.3-201ENST00000642066 185 ntBASIC5.59□□□□□ -1.51
CNGA1P29973 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNGA1P29973 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNGA1P29973 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.59□□□□□ -1.52
CNGA1P29973 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNGA1P29973 MTCO1P14-201ENST00000441695 1559 ntBASIC5.59□□□□□ -1.52
CNGA1P29973 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CNGA1P29973 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNGA1P29973 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 ELL2P4-201ENST00000446870 1376 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNGA1P29973 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNGA1P29973 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNGA1P29973 OR4K15-201ENST00000305051 1216 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 RNU6-1226P-201ENST00000384317 107 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNGA1P29973 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNGA1P29973 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 SNRPEP2-201ENST00000397592 279 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 RNU6-920P-201ENST00000410926 92 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 CEACAMP8-201ENST00000413902 580 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.58□□□□□ -1.52
CNGA1P29973 RPL23AP39-201ENST00000415533 405 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 MORF4L1P6-201ENST00000418771 268 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.58□□□□□ -1.52
CNGA1P29973 COX6CP13-201ENST00000428703 226 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 MTND1P20-201ENST00000430341 950 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.58□□□□□ -1.52
CNGA1P29973 MTND1P29-201ENST00000448112 647 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.58□□□□□ -1.52
CNGA1P29973 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 OR6C5P-201ENST00000452388 923 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNGA1P29973 RPS20P21-201ENST00000466859 343 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC013356.1-201ENST00000489027 564 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC100784.1-201ENST00000522790 310 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC008127.2-201ENST00000549925 1075 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC127024.5-201ENST00000580085 462 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.58□□□□□ -1.52
CNGA1P29973 AC083899.3-201ENST00000603413 594 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AC020910.2-201ENST00000603635 610 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 MLECP1-201ENST00000615893 709 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNGA1P29973 CR381670.1-201ENST00000624291 1693 ntBASIC5.58□□□□□ -1.52
CNGA1P29973 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNGA1P29973 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.58□□□□□ -1.52
CNGA1P29973 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNGA1P29973 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.57□□□□□ -1.52
CNGA1P29973 DHX40P1-201ENST00000588725 1412 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNGA1P29973 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
CNGA1P29973 AC108751.5-201ENST00000492880 1336 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNGA1P29973 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CNGA1P29973 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CNGA1P29973 AL731566.1-201ENST00000620490 1937 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 RPL21P132-201ENST00000331267 462 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 AL035079.1-201ENST00000405210 287 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 RN7SKP182-201ENST00000410772 298 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 AC069218.2-201ENST00000411665 344 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 RPS27AP7-201ENST00000422792 455 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 CHIAP3-201ENST00000423668 1133 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 COX6CP15-201ENST00000426313 211 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNGA1P29973 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 AC098826.1-201ENST00000433943 471 ntBASIC5.57□□□□□ -1.52
CNGA1P29973 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.57□□□□□ -1.52
CNGA1P29973 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.57□□□□□ -1.52
CNGA1P29973 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms