Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.78□□□□□ -1.8
COL4A5P29400 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A5P29400 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A5P29400 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A5P29400 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
COL4A5P29400 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A5P29400 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
COL4A5P29400 CEP170P1-201ENST00000502249 4587 ntBASIC3.78□□□□□ -1.8
COL4A5P29400 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A5P29400 AL356968.1-201ENST00000416622 474 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.78□□□□□ -1.81
COL4A5P29400 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.78□□□□□ -1.81
COL4A5P29400 NANOGP6-201ENST00000429190 847 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC093156.1-201ENST00000440382 670 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 RPL32P28-201ENST00000443577 397 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 HMGN2P7-201ENST00000456186 273 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC022795.1-201ENST00000473808 480 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.81
COL4A5P29400 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.78□□□□□ -1.81
COL4A5P29400 AP000859.1-201ENST00000525536 307 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 H3F3AP1-201ENST00000559984 334 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.78□□□□□ -1.81
COL4A5P29400 AC099489.2-201ENST00000574976 260 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC233702.9-201ENST00000581528 203 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC015813.4-201ENST00000610469 179 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 AC099506.2-201ENST00000623074 221 ntBASIC3.78□□□□□ -1.81
COL4A5P29400 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A5P29400 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A5P29400 RNU6-316P-201ENST00000391027 107 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 RNA5SP293-201ENST00000410527 113 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 RN7SKP222-201ENST00000410651 315 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 AC002075.2-201ENST00000425207 252 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.77□□□□□ -1.81
COL4A5P29400 KATNBL1P2-201ENST00000433311 835 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 AC108734.1-201ENST00000439549 399 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.77□□□□□ -1.81
COL4A5P29400 AC099560.2-201ENST00000457554 255 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
COL4A5P29400 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A5P29400 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A5P29400 AC018529.3-201ENST00000624212 2254 ntBASIC3.77□□□□□ -1.81
COL4A5P29400 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A5P29400 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.76□□□□□ -1.81
COL4A5P29400 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A5P29400 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A5P29400 MTCO1P8-201ENST00000416914 1523 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 AL136116.1-201ENST00000403591 381 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 NACAP7-201ENST00000407371 609 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 RPL7P8-201ENST00000411964 730 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 AC073069.1-201ENST00000428657 441 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 ELOCP23-201ENST00000452014 332 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.76□□□□□ -1.81
COL4A5P29400 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.76□□□□□ -1.81
COL4A5P29400 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.76□□□□□ -1.81
COL4A5P29400 HIGD1AP13-201ENST00000509878 289 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.76□□□□□ -1.81
COL4A5P29400 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
COL4A5P29400 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.76□□□□□ -1.81
COL4A5P29400 AL096803.3-201ENST00000609032 532 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 MIR622-201ENST00000638396 96 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 AC017071.1-201ENST00000564407 2204 ntBASIC3.76□□□□□ -1.81
COL4A5P29400 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A5P29400 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A5P29400 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.76□□□□□ -1.81
COL4A5P29400 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.76□□□□□ -1.81
COL4A5P29400 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A5P29400 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A5P29400 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A5P29400 U3.12-201ENST00000364498 214 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
COL4A5P29400 AL121890.1-201ENST00000435457 205 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 DNAJC19P1-201ENST00000455312 319 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
COL4A5P29400 RNU6-237P-201ENST00000515985 71 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 SNORA70.19-201ENST00000516717 90 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 AC107934.2-201ENST00000518653 310 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A5P29400 AC079600.2-201ENST00000550076 130 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A5P29400 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.75□□□□□ -1.81
COL4A5P29400 OR2AS2P-201ENST00000606902 342 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 TUG1_1.1-201ENST00000610654 145 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.75□□□□□ -1.81
COL4A5P29400 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
COL4A5P29400 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A5P29400 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A5P29400 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.75□□□□□ -1.81
COL4A5P29400 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL4A5P29400 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.75□□□□□ -1.81
COL4A5P29400 OR56A5-201ENST00000340110 738 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
COL4A5P29400 RN7SKP56-201ENST00000410513 331 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 OR2X1P-201ENST00000421144 687 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 AL133477.1-201ENST00000457472 514 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 AC126389.1-201ENST00000477436 290 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 ACTG1P13-201ENST00000486987 1043 ntBASIC3.75□□□□□ -1.81
COL4A5P29400 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL4A5P29400 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.75□□□□□ -1.81
COL4A5P29400 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms