Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PTPN6P29350 SAGE4P-201ENST00000442271 3381 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 MAPK10-372ENST00000641954 3413 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PTPN6P29350 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTPN6P29350 AC016716.1-201ENST00000265882 708 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTPN6P29350 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 MIR1250-201ENST00000408098 113 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 RNU6-272P-201ENST00000411028 104 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 DEFB130D-201ENST00000426866 237 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 OR4F13P-201ENST00000428478 931 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 RPS27AP12-201ENST00000429552 465 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN6P29350 CKS1BP5-201ENST00000434172 273 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 VN1R25P-201ENST00000443385 738 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN6P29350 VN1R40P-201ENST00000455196 941 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN6P29350 AC015724.1-201ENST00000478577 156 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 RPL7P24-201ENST00000493052 752 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN6P29350 RNU2-58P-201ENST00000516403 183 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN6P29350 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.83□□□□□ -1.8
PTPN6P29350 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 GNRHR2P1-201ENST00000555315 631 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AC023824.3-201ENST00000569003 562 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 MIR5684-201ENST00000585074 65 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 RN7SL622P-201ENST00000585292 275 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 MRPS35P3-201ENST00000603189 709 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 MTATP6P2-201ENST00000603319 678 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AP003392.5-201ENST00000607857 415 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AP005229.2-201ENST00000609980 697 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AP000255.1-201ENST00000610276 676 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN6P29350 AL109659.3-201ENST00000624985 950 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN6P29350 MIR492-201ENST00000638676 116 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 MTCO1P6-201ENST00000481192 1384 ntBASIC3.83□□□□□ -1.8
PTPN6P29350 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN6P29350 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN6P29350 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN6P29350 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PTPN6P29350 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN6P29350 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 Z82217.1-201ENST00000625157 8149 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PTPN6P29350 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 Y_RNA.126-201ENST00000363382 111 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 RNA5SP189-201ENST00000364920 115 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PTPN6P29350 AL022722.2-201ENST00000402519 180 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 MIR1183-201ENST00000408856 89 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 RN7SKP263-201ENST00000411194 309 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN6P29350 OR51AB1P-201ENST00000429046 620 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AL512637.2-201ENST00000431287 1256 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN6P29350 AL138799.3-201ENST00000438968 350 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN6P29350 AL158053.1-201ENST00000441503 453 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 Z77249.1-201ENST00000444622 1175 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AL590399.6-201ENST00000446396 307 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC005002.1-201ENST00000447458 540 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC114755.5-201ENST00000447760 831 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN6P29350 AL133477.1-201ENST00000457472 514 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 RN7SL271P-201ENST00000487601 295 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC069499.1-201ENST00000489433 509 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC078918.1-201ENST00000498515 228 ntBASIC3.82□□□□□ -1.8
PTPN6P29350 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN6P29350 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN6P29350 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN6P29350 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN6P29350 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms