Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.67□□□□□ -1.66
BDNFP23560 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.67□□□□□ -1.66
BDNFP23560 SNORA70.14-201ENST00000516205 110 ntBASIC4.67□□□□□ -1.66
BDNFP23560 AC008802.1-201ENST00000519121 791 ntBASIC4.67□□□□□ -1.66
BDNFP23560 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.67□□□□□ -1.66
BDNFP23560 AP000790.1-201ENST00000528891 737 ntBASIC4.67□□□□□ -1.66
BDNFP23560 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.67□□□□□ -1.66
BDNFP23560 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.67□□□□□ -1.66
BDNFP23560 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
BDNFP23560 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.67□□□□□ -1.66
BDNFP23560 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.67□□□□□ -1.66
BDNFP23560 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.67□□□□□ -1.66
BDNFP23560 AC006338.2-201ENST00000616864 791 ntBASIC4.67□□□□□ -1.66
BDNFP23560 AP002371.2-201ENST00000624450 503 ntBASIC4.67□□□□□ -1.66
BDNFP23560 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.67□□□□□ -1.66
BDNFP23560 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.67□□□□□ -1.66
BDNFP23560 MTND2P41-201ENST00000637599 773 ntBASIC4.67□□□□□ -1.66
BDNFP23560 OR52H1-202ENST00000641796 1061 ntBASIC4.67□□□□□ -1.66
BDNFP23560 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BDNFP23560 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BDNFP23560 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BDNFP23560 AC010300.1-201ENST00000600671 5134 ntBASIC4.67□□□□□ -1.66
BDNFP23560 GDI2P1-201ENST00000429312 1336 ntBASIC4.67□□□□□ -1.66
BDNFP23560 AC006971.1-201ENST00000407916 4486 ntBASIC4.67□□□□□ -1.66
BDNFP23560 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
BDNFP23560 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BDNFP23560 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BDNFP23560 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 HSPD1P14-201ENST00000432666 1618 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AF127577.6-201ENST00000623352 2191 ntBASIC4.66□□□□□ -1.66
BDNFP23560 RNU6-492P-201ENST00000363035 104 ntBASIC4.66□□□□□ -1.66
BDNFP23560 RNA5SP28-201ENST00000363841 119 ntBASIC4.66□□□□□ -1.66
BDNFP23560 RNU6-730P-201ENST00000383954 104 ntBASIC4.66□□□□□ -1.66
BDNFP23560 SNORD96B-201ENST00000386148 79 ntBASIC4.66□□□□□ -1.66
BDNFP23560 BTF3P8-201ENST00000414577 526 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.66□□□□□ -1.66
BDNFP23560 SDCBPP2-201ENST00000424643 885 ntBASIC4.66□□□□□ -1.66
BDNFP23560 RPL23AP25-201ENST00000430973 463 ntBASIC4.66□□□□□ -1.66
BDNFP23560 MRPS18BP2-201ENST00000434310 759 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 ANP32BP2-201ENST00000454525 545 ntBASIC4.66□□□□□ -1.66
BDNFP23560 RPS20P24-201ENST00000457473 361 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.66□□□□□ -1.66
BDNFP23560 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.66□□□□□ -1.66
BDNFP23560 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC108043.1-201ENST00000512696 574 ntBASIC4.66□□□□□ -1.66
BDNFP23560 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.66□□□□□ -1.66
BDNFP23560 AC112198.4-201ENST00000515450 351 ntBASIC4.66□□□□□ -1.66
BDNFP23560 RN7SKP122-201ENST00000515923 296 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.66□□□□□ -1.66
BDNFP23560 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.66□□□□□ -1.66
BDNFP23560 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.66□□□□□ -1.66
BDNFP23560 MED28P5-201ENST00000528254 438 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.66□□□□□ -1.66
BDNFP23560 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.66□□□□□ -1.66
BDNFP23560 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.66□□□□□ -1.66
BDNFP23560 AC023825.1-201ENST00000566704 1030 ntBASIC4.66□□□□□ -1.66
BDNFP23560 MIR3690-201ENST00000580266 75 ntBASIC4.66□□□□□ -1.66
BDNFP23560 MIR3138-201ENST00000585238 82 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC079587.1-201ENST00000603846 277 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC113403.1-201ENST00000604910 193 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AL590392.1-201ENST00000604960 446 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC128687.1-201ENST00000605304 619 ntBASIC4.66□□□□□ -1.66
BDNFP23560 uc_338.13-201ENST00000618243 179 ntBASIC4.66□□□□□ -1.66
BDNFP23560 RMST_9.1-201ENST00000619945 193 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AC009318.4-201ENST00000620496 486 ntBASIC4.66□□□□□ -1.66
BDNFP23560 AP003485.1-201ENST00000625093 753 ntBASIC4.66□□□□□ -1.66
BDNFP23560 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
BDNFP23560 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.66□□□□□ -1.66
BDNFP23560 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.66□□□□□ -1.66
BDNFP23560 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BDNFP23560 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
BDNFP23560 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.65□□□□□ -1.66
BDNFP23560 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
BDNFP23560 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.65□□□□□ -1.66
BDNFP23560 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
BDNFP23560 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
BDNFP23560 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
BDNFP23560 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
BDNFP23560 RNU6-263P-201ENST00000363811 107 ntBASIC4.65□□□□□ -1.67
BDNFP23560 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.65□□□□□ -1.67
BDNFP23560 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.65□□□□□ -1.67
BDNFP23560 RNU6-1257P-201ENST00000384625 110 ntBASIC4.65□□□□□ -1.67
BDNFP23560 AL583834.1-201ENST00000406943 343 ntBASIC4.65□□□□□ -1.67
BDNFP23560 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
BDNFP23560 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms