Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF4P23510 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF4P23510 GTF2F2P1-201ENST00000511083 675 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC012400.1-201ENST00000518452 381 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF4P23510 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF4P23510 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF4P23510 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFSF4P23510 AL022161.1-201ENST00000604390 213 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC009597.2-201ENST00000604659 592 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC055876.5-201ENST00000605667 259 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC135507.1-201ENST00000607214 561 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC103710.4-201ENST00000609301 899 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 EIF3FP1-201ENST00000613970 806 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 MIR6886-201ENST00000619864 61 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF4P23510 AP000648.2-201ENST00000624182 404 ntBASIC4.53□□□□□ -1.68
TNFSF4P23510 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.53□□□□□ -1.68
TNFSF4P23510 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TNFSF4P23510 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFSF4P23510 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
TNFSF4P23510 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFSF4P23510 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.53□□□□□ -1.69
TNFSF4P23510 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
TNFSF4P23510 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFSF4P23510 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 RNA5SP258-201ENST00000362750 119 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 U3.7-201ENST00000363668 216 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 SNORA48.4-201ENST00000391089 134 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 HSPD1P16-201ENST00000402302 394 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC109780.2-201ENST00000413467 845 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC127526.1-201ENST00000417526 366 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AC108075.1-201ENST00000424692 529 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 RPS27P18-201ENST00000431701 247 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 VN1R54P-201ENST00000435210 1049 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 RSU1P2-202ENST00000437884 485 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 TCEA1P3-201ENST00000443005 880 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 RN7SL172P-201ENST00000460535 303 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 ST13P14-201ENST00000474095 734 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 RPS21P4-201ENST00000487122 248 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 RN7SL629P-201ENST00000489622 285 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFSF4P23510 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 GTF2IP22-201ENST00000554443 182 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFSF4P23510 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 RPL10P14-201ENST00000565265 298 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 MIR544B-201ENST00000582372 78 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC069307.1-201ENST00000602820 447 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AP000403.1-201ENST00000603349 851 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF4P23510 PRELID3BP8-201ENST00000604148 295 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 TAS2R6P-201ENST00000605022 826 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AL365503.1-201ENST00000605247 905 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AL031775.1-201ENST00000607014 887 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AC064807.4-201ENST00000607201 407 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AL158063.1-201ENST00000615349 536 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TNFSF4P23510 PABPC1P9-201ENST00000426076 1612 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
TNFSF4P23510 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 AC006378.2-201ENST00000623178 2476 ntBASIC4.52□□□□□ -1.69
TNFSF4P23510 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFSF4P23510 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF4P23510 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms