Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL138785.1-201ENST00000425821 331 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 OR5AW1P-201ENST00000426334 1006 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
XRCC1P18887 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
XRCC1P18887 RPS7P5-201ENST00000441482 581 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 RRM2P4-201ENST00000441721 562 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.83□□□□□ -1.8
XRCC1P18887 AL035407.2-201ENST00000454090 378 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 SNRPGP5-201ENST00000456003 220 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 SETP6-201ENST00000479329 568 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 GAPDHP36-201ENST00000480688 918 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 IGKV2D-23-201ENST00000518179 286 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
XRCC1P18887 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.83□□□□□ -1.8
XRCC1P18887 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.83□□□□□ -1.8
XRCC1P18887 OR4U1P-201ENST00000554958 912 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.83□□□□□ -1.8
XRCC1P18887 AL133457.1-201ENST00000564251 987 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.83□□□□□ -1.8
XRCC1P18887 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 AL591424.2-201ENST00000617023 128 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 AC244205.2-202ENST00000635781 342 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 MFSD8-213ENST00000641134 1327 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
XRCC1P18887 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
XRCC1P18887 MTCO1P4-201ENST00000520516 1409 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 MTCO1P14-201ENST00000441695 1559 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
XRCC1P18887 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
XRCC1P18887 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
XRCC1P18887 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
XRCC1P18887 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
XRCC1P18887 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
XRCC1P18887 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.82□□□□□ -1.8
XRCC1P18887 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
XRCC1P18887 MTND4P10-201ENST00000446199 1363 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
XRCC1P18887 MIR16-2-201ENST00000362117 81 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 RNU1-87P-201ENST00000363727 170 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 RNA5SP27-201ENST00000363839 119 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 SNORD56.4-201ENST00000363883 71 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.82□□□□□ -1.8
XRCC1P18887 ZNF602P-201ENST00000405929 924 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 RN7SKP27-201ENST00000410684 333 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 RNU4-27P-201ENST00000410889 139 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 CYCSP19-201ENST00000411715 316 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC092745.2-202ENST00000411880 369 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.82□□□□□ -1.8
XRCC1P18887 AC019070.1-201ENST00000415008 1024 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AL365396.1-201ENST00000430854 671 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC007389.2-201ENST00000434630 306 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.82□□□□□ -1.8
XRCC1P18887 ELOCP11-201ENST00000436690 332 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.82□□□□□ -1.8
XRCC1P18887 HMGB1P37-201ENST00000439613 609 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC009263.1-201ENST00000441193 1239 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC092809.1-201ENST00000441469 474 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.82□□□□□ -1.8
XRCC1P18887 ELOCP16-201ENST00000444494 332 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 EXTL2P1-201ENST00000446218 416 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.82□□□□□ -1.8
XRCC1P18887 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.82□□□□□ -1.8
XRCC1P18887 RPL7P55-201ENST00000450522 746 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC010307.1-201ENST00000467206 836 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 PPIAP15-201ENST00000479662 484 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 RPL21P47-201ENST00000483696 477 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.82□□□□□ -1.8
XRCC1P18887 RN7SL323P-201ENST00000494712 295 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 RPL30P11-201ENST00000495304 339 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 SAP18P1-201ENST00000512058 390 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC087369.1-201ENST00000520775 996 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
XRCC1P18887 MED28P5-201ENST00000528254 438 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC093510.2-201ENST00000562820 896 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.82□□□□□ -1.8
XRCC1P18887 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.82□□□□□ -1.8
XRCC1P18887 AC090312.2-201ENST00000582687 378 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.82□□□□□ -1.8
XRCC1P18887 NTAN1P1-201ENST00000603150 646 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.82□□□□□ -1.8
XRCC1P18887 RMST_10.1-201ENST00000616309 154 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AL163051.2-201ENST00000618976 735 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 CFTRP2-201ENST00000634304 199 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
XRCC1P18887 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.82□□□□□ -1.8
XRCC1P18887 AL161912.2-201ENST00000565707 3007 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 AP001486.2-201ENST00000561652 5113 ntBASIC3.82□□□□□ -1.8
XRCC1P18887 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
XRCC1P18887 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.82□□□□□ -1.8
XRCC1P18887 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms