Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
COL11A1P12107 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A1P12107 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A1P12107 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL11A1P12107 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.65□□□□□ -1.82
COL11A1P12107 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.65□□□□□ -1.83
COL11A1P12107 AC007390.2-201ENST00000606229 3803 ntBASIC3.65□□□□□ -1.83
COL11A1P12107 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
COL11A1P12107 AL024507.1-201ENST00000412741 274 ntBASIC3.65□□□□□ -1.83
COL11A1P12107 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.65□□□□□ -1.83
COL11A1P12107 RPL7P28-201ENST00000437739 740 ntBASIC3.65□□□□□ -1.83
COL11A1P12107 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.65□□□□□ -1.83
COL11A1P12107 MRPS31P2-201ENST00000451581 518 ntBASIC3.65□□□□□ -1.83
COL11A1P12107 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL11A1P12107 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.65□□□□□ -1.83
COL11A1P12107 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.65□□□□□ -1.83
COL11A1P12107 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.65□□□□□ -1.83
COL11A1P12107 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.65□□□□□ -1.83
COL11A1P12107 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.65□□□□□ -1.83
COL11A1P12107 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
COL11A1P12107 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL11A1P12107 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.64□□□□□ -1.83
COL11A1P12107 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL11A1P12107 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL11A1P12107 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 ANKRD36P1-201ENST00000344424 659 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL11A1P12107 RNA5SP296-201ENST00000410523 111 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.64□□□□□ -1.83
COL11A1P12107 AL513174.1-201ENST00000423182 629 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 AC105272.1-201ENST00000438604 198 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.64□□□□□ -1.83
COL11A1P12107 RPL12P26-201ENST00000452430 487 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 CCDC75P1-201ENST00000469247 791 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.64□□□□□ -1.83
COL11A1P12107 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.64□□□□□ -1.83
COL11A1P12107 NDUFB9P3-201ENST00000521269 501 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 AP000859.1-201ENST00000525536 307 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 CYP2C60P-201ENST00000566088 139 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.64□□□□□ -1.83
COL11A1P12107 AL122125.1-201ENST00000616999 600 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 BMS1P21-201ENST00000634565 365 ntBASIC3.64□□□□□ -1.83
COL11A1P12107 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
COL11A1P12107 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.64□□□□□ -1.83
COL11A1P12107 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.64□□□□□ -1.83
COL11A1P12107 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.64□□□□□ -1.83
COL11A1P12107 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL11A1P12107 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL11A1P12107 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
COL11A1P12107 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
COL11A1P12107 RN7SKP56-201ENST00000410513 331 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 RHEBP3-201ENST00000411920 351 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.63□□□□□ -1.83
COL11A1P12107 AC006028.1-201ENST00000438379 402 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC133473.1-201ENST00000455173 299 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC087312.1-201ENST00000471411 480 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 RPS4XP13-201ENST00000483219 789 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.63□□□□□ -1.83
COL11A1P12107 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.63□□□□□ -1.83
COL11A1P12107 AC107934.2-201ENST00000518653 310 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC015917.1-201ENST00000579654 510 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC006023.1-201ENST00000603944 259 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AL158196.1-201ENST00000616786 434 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.63□□□□□ -1.83
COL11A1P12107 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
COL11A1P12107 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 NACA3P-201ENST00000359690 648 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 UBE2V1P2-201ENST00000397758 440 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 RNA5SP80-201ENST00000410475 111 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AL445213.1-201ENST00000412589 747 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 BX890604.2-201ENST00000427883 474 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.63□□□□□ -1.83
COL11A1P12107 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.63□□□□□ -1.83
COL11A1P12107 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.63□□□□□ -1.83
COL11A1P12107 RPS12P18-201ENST00000442381 270 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 Z99127.3-201ENST00000448158 395 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC091826.1-201ENST00000514065 313 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.63□□□□□ -1.83
COL11A1P12107 MIR4738-201ENST00000579134 87 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC015849.2-201ENST00000605738 409 ntBASIC3.63□□□□□ -1.83
COL11A1P12107 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.63□□□□□ -1.83
COL11A1P12107 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL11A1P12107 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
COL11A1P12107 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL11A1P12107 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.62□□□□□ -1.83
COL11A1P12107 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL11A1P12107 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms