Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.49□□□□□ -1.53
TOP2AP11388 HMGB1P16-201ENST00000447155 540 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 RPL37P4-201ENST00000448908 268 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 MTCO3P16-201ENST00000454456 754 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.49□□□□□ -1.53
TOP2AP11388 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TOP2AP11388 AC010653.1-201ENST00000571108 881 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 AL390838.2-201ENST00000602394 274 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 ATP1B3P1-201ENST00000605365 821 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC5.49□□□□□ -1.53
TOP2AP11388 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TOP2AP11388 AC011503.2-201ENST00000594230 1500 ntBASIC5.49□□□□□ -1.53
TOP2AP11388 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.48□□□□□ -1.53
TOP2AP11388 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.48□□□□□ -1.53
TOP2AP11388 RPS4XP13-201ENST00000483219 789 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 OR2A20P-203ENST00000498397 1268 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.48□□□□□ -1.53
TOP2AP11388 AC026801.2-201ENST00000515352 425 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 AC245100.7-201ENST00000609678 442 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 ZNF90P1-201ENST00000480493 1951 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TOP2AP11388 AC104297.1-201ENST00000393779 870 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.48□□□□□ -1.53
TOP2AP11388 NUP35P1-201ENST00000422734 947 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.48□□□□□ -1.53
TOP2AP11388 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TOP2AP11388 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.48□□□□□ -1.53
TOP2AP11388 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.48□□□□□ -1.53
TOP2AP11388 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.48□□□□□ -1.53
TOP2AP11388 SETP1-201ENST00000556014 845 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 MIR3124-201ENST00000582636 67 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.48□□□□□ -1.53
TOP2AP11388 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.48□□□□□ -1.53
TOP2AP11388 AL034351.1-201ENST00000605288 668 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 uc_338.1-201ENST00000612113 180 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 AL359715.5-201ENST00000623431 443 ntBASIC5.48□□□□□ -1.53
TOP2AP11388 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.48□□□□□ -1.53
TOP2AP11388 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TOP2AP11388 AC004944.1-201ENST00000517807 3059 ntBASIC5.47□□□□□ -1.53
TOP2AP11388 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TOP2AP11388 OR5J1P-201ENST00000313544 939 ntBASIC5.47□□□□□ -1.53
TOP2AP11388 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.47□□□□□ -1.53
TOP2AP11388 AL139281.1-201ENST00000422120 335 ntBASIC5.47□□□□□ -1.53
TOP2AP11388 AC093156.1-201ENST00000440382 670 ntBASIC5.47□□□□□ -1.53
TOP2AP11388 RN7SKP132-201ENST00000516001 208 ntBASIC5.47□□□□□ -1.53
TOP2AP11388 AC009812.2-201ENST00000517657 457 ntBASIC5.47□□□□□ -1.53
TOP2AP11388 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.47□□□□□ -1.53
TOP2AP11388 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.47□□□□□ -1.53
TOP2AP11388 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TOP2AP11388 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TOP2AP11388 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TOP2AP11388 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.46□□□□□ -1.54
TOP2AP11388 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TOP2AP11388 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TOP2AP11388 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.46□□□□□ -1.54
TOP2AP11388 MTCO3P20-201ENST00000454926 688 ntBASIC5.46□□□□□ -1.54
TOP2AP11388 MIR2276-201ENST00000516886 89 ntBASIC5.46□□□□□ -1.54
TOP2AP11388 AC010306.1-201ENST00000523223 1117 ntBASIC5.46□□□□□ -1.54
TOP2AP11388 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.46□□□□□ -1.54
TOP2AP11388 MIR4319-201ENST00000577285 85 ntBASIC5.46□□□□□ -1.54
TOP2AP11388 AC116312.1-201ENST00000606841 314 ntBASIC5.46□□□□□ -1.54
TOP2AP11388 AC007998.5-201ENST00000622938 237 ntBASIC5.46□□□□□ -1.54
TOP2AP11388 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TOP2AP11388 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TOP2AP11388 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TOP2AP11388 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.46□□□□□ -1.54
TOP2AP11388 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TOP2AP11388 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TOP2AP11388 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TOP2AP11388 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.45□□□□□ -1.54
TOP2AP11388 AP002088.1-201ENST00000382740 395 ntBASIC5.45□□□□□ -1.54
TOP2AP11388 AC011242.1-201ENST00000433596 1158 ntBASIC5.45□□□□□ -1.54
TOP2AP11388 RPL12P46-201ENST00000436610 195 ntBASIC5.45□□□□□ -1.54
TOP2AP11388 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.45□□□□□ -1.54
TOP2AP11388 AC118465.1-201ENST00000513820 1271 ntBASIC5.45□□□□□ -1.54
TOP2AP11388 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.45□□□□□ -1.54
TOP2AP11388 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.45□□□□□ -1.54
TOP2AP11388 AC090971.4-201ENST00000560291 1800 ntBASIC5.45□□□□□ -1.54
TOP2AP11388 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
TOP2AP11388 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TOP2AP11388 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TOP2AP11388 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TOP2AP11388 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TOP2AP11388 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 NARSP2-201ENST00000518524 679 ntBASIC5.44□□□□□ -1.54
TOP2AP11388 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.44□□□□□ -1.54
TOP2AP11388 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 AC018552.3-201ENST00000567416 561 ntBASIC5.44□□□□□ -1.54
TOP2AP11388 AL590240.3-201ENST00000621416 943 ntBASIC5.44□□□□□ -1.54
TOP2AP11388 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TOP2AP11388 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC5.44□□□□□ -1.54
TOP2AP11388 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
TOP2AP11388 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.44□□□□□ -1.54
TOP2AP11388 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TOP2AP11388 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TOP2AP11388 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms