Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL1P09341 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC007563.3-201ENST00000433233 371 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL1P09341 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC239367.2-201ENST00000447309 705 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC089999.1-201ENST00000460336 374 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 RN7SL610P-201ENST00000463845 291 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AC091564.1-201ENST00000464563 479 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AC146507.1-201ENST00000468335 354 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 MRPL49P2-201ENST00000521066 465 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL1P09341 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 PTP4A1P6-201ENST00000531034 478 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.65□□□□□ -1.99
CXCL1P09341 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC015726.1-201ENST00000602353 681 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AP003117.1-201ENST00000602771 554 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 MTCO2P22-201ENST00000603246 681 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AC112503.1-201ENST00000608436 391 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AC090425.2-201ENST00000608818 501 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 Mico1.1-201ENST00000611698 204 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AC005156.1-201ENST00000613371 573 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AL354976.1-201ENST00000613843 387 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 AC022079.2-201ENST00000619739 566 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 MIR6500-201ENST00000622700 86 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL1P09341 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL1P09341 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.65□□□□□ -1.99
CXCL1P09341 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CXCL1P09341 FAM35CP-201ENST00000554755 2470 ntBASIC2.65□□□□□ -1.99
CXCL1P09341 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL1P09341 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL1P09341 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CXCL1P09341 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CXCL1P09341 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL1P09341 AL353743.1-202ENST00000431724 1695 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 RNU6-666P-201ENST00000363499 107 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CXCL1P09341 RNU6-213P-201ENST00000384051 104 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 U3.22-201ENST00000391120 215 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 RPL21P65-201ENST00000406094 466 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 AC007394.1-201ENST00000421941 531 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AC009480.2-201ENST00000422916 432 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 DPPA2P1-201ENST00000428060 556 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 YWHAZP7-201ENST00000436906 631 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 CBX1P4-201ENST00000439415 457 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.64□□□□□ -1.99
CXCL1P09341 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.64□□□□□ -1.99
CXCL1P09341 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 RNU4-60P-201ENST00000517239 135 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AP001207.2-201ENST00000519490 539 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.64□□□□□ -1.99
CXCL1P09341 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.64□□□□□ -1.99
CXCL1P09341 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CXCL1P09341 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.64□□□□□ -1.99
CXCL1P09341 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.64□□□□□ -1.99
CXCL1P09341 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.64□□□□□ -1.99
CXCL1P09341 MIR5187-201ENST00000583479 76 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AC010928.3-201ENST00000587712 541 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.64□□□□□ -1.99
CXCL1P09341 AL591034.3-201ENST00000605511 685 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AC018754.1-201ENST00000607486 925 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 CR392039.4-201ENST00000624968 501 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AC092184.1-201ENST00000625042 715 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 AL157700.1-201ENST00000561973 1432 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL1P09341 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CXCL1P09341 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL1P09341 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL1P09341 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL1P09341 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CXCL1P09341 AC017071.1-201ENST00000564407 2204 ntBASIC2.64□□□□□ -1.99
CXCL1P09341 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CXCL1P09341 RLIMP1-201ENST00000339626 1680 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CXCL1P09341 SNORA46-201ENST00000384762 135 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 CYB5AP4-201ENST00000396692 399 ntBASIC2.63□□□□□ -1.99
CXCL1P09341 AL022722.2-201ENST00000402519 180 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms