Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
RETP07949 MIR92A2-201ENST00000385299 75 ntBASIC3.86□□□□□ -1.79
RETP07949 SNORA48.2-201ENST00000390926 124 ntBASIC3.86□□□□□ -1.79
RETP07949 SNORD65-201ENST00000391079 73 ntBASIC3.86□□□□□ -1.79
RETP07949 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.86□□□□□ -1.79
RETP07949 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.86□□□□□ -1.79
RETP07949 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.86□□□□□ -1.79
RETP07949 HIGD1AP4-201ENST00000430194 280 ntBASIC3.86□□□□□ -1.79
RETP07949 AC097713.2-201ENST00000430199 356 ntBASIC3.86□□□□□ -1.79
RETP07949 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.86□□□□□ -1.79
RETP07949 RPL21P23-201ENST00000446654 460 ntBASIC3.86□□□□□ -1.79
RETP07949 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.86□□□□□ -1.79
RETP07949 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
RETP07949 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RETP07949 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.86□□□□□ -1.79
RETP07949 AC117525.1-201ENST00000515228 503 ntBASIC3.86□□□□□ -1.79
RETP07949 Vault.1-201ENST00000516474 102 ntBASIC3.86□□□□□ -1.79
RETP07949 RNU6-347P-201ENST00000516658 105 ntBASIC3.86□□□□□ -1.79
RETP07949 AC007991.1-201ENST00000522680 631 ntBASIC3.86□□□□□ -1.79
RETP07949 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RETP07949 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.86□□□□□ -1.79
RETP07949 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.86□□□□□ -1.79
RETP07949 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.86□□□□□ -1.79
RETP07949 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.86□□□□□ -1.79
RETP07949 AC022146.1-201ENST00000595307 847 ntBASIC3.86□□□□□ -1.79
RETP07949 BMS1P7-201ENST00000602440 1052 ntBASIC3.86□□□□□ -1.79
RETP07949 HMGB1P51-201ENST00000605166 638 ntBASIC3.86□□□□□ -1.79
RETP07949 AL034351.1-201ENST00000605288 668 ntBASIC3.86□□□□□ -1.79
RETP07949 AC010680.4-201ENST00000605334 543 ntBASIC3.86□□□□□ -1.79
RETP07949 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.86□□□□□ -1.79
RETP07949 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.86□□□□□ -1.79
RETP07949 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.86□□□□□ -1.79
RETP07949 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RETP07949 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RETP07949 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.86□□□□□ -1.79
RETP07949 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.86□□□□□ -1.79
RETP07949 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.86□□□□□ -1.79
RETP07949 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RETP07949 TNPO1P3-201ENST00000436471 2662 ntBASIC3.86□□□□□ -1.79
RETP07949 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RETP07949 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RETP07949 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RETP07949 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.85□□□□□ -1.79
RETP07949 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
RETP07949 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RETP07949 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RETP07949 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.85□□□□□ -1.79
RETP07949 AL034374.1-201ENST00000406329 351 ntBASIC3.85□□□□□ -1.79
RETP07949 RHEBP3-201ENST00000411920 351 ntBASIC3.85□□□□□ -1.79
RETP07949 AC236972.1-201ENST00000433225 199 ntBASIC3.85□□□□□ -1.79
RETP07949 CACYBPP1-201ENST00000438592 684 ntBASIC3.85□□□□□ -1.79
RETP07949 VN1R25P-201ENST00000443385 738 ntBASIC3.85□□□□□ -1.79
RETP07949 VN1R40P-201ENST00000455196 941 ntBASIC3.85□□□□□ -1.79
RETP07949 CFTRP1-201ENST00000456646 183 ntBASIC3.85□□□□□ -1.79
RETP07949 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.85□□□□□ -1.79
RETP07949 AL136126.1-201ENST00000473603 402 ntBASIC3.85□□□□□ -1.79
RETP07949 AC078785.3-201ENST00000476607 425 ntBASIC3.85□□□□□ -1.79
RETP07949 AC005726.1-201ENST00000494679 427 ntBASIC3.85□□□□□ -1.79
RETP07949 AC010342.1-201ENST00000514047 877 ntBASIC3.85□□□□□ -1.79
RETP07949 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.85□□□□□ -1.79
RETP07949 AC090136.1-201ENST00000520009 240 ntBASIC3.85□□□□□ -1.79
RETP07949 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.85□□□□□ -1.79
RETP07949 MTND1P6-201ENST00000523621 946 ntBASIC3.85□□□□□ -1.79
RETP07949 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.85□□□□□ -1.79
RETP07949 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.85□□□□□ -1.79
RETP07949 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.85□□□□□ -1.79
RETP07949 AC007687.1-201ENST00000602704 304 ntBASIC3.85□□□□□ -1.79
RETP07949 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.85□□□□□ -1.79
RETP07949 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.85□□□□□ -1.79
RETP07949 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.85□□□□□ -1.79
RETP07949 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.85□□□□□ -1.79
RETP07949 DCAF13P3-201ENST00000561147 1334 ntBASIC3.85□□□□□ -1.79
RETP07949 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.85□□□□□ -1.79
RETP07949 ZNF833P-201ENST00000424938 1494 ntBASIC3.85□□□□□ -1.79
RETP07949 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.85□□□□□ -1.79
RETP07949 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.79
RETP07949 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.84□□□□□ -1.79
RETP07949 RNA5SP50-201ENST00000363731 107 ntBASIC3.84□□□□□ -1.79
RETP07949 RNA5SP399-201ENST00000364003 117 ntBASIC3.84□□□□□ -1.79
RETP07949 Y_RNA.500-201ENST00000384466 111 ntBASIC3.84□□□□□ -1.79
RETP07949 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RETP07949 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
RETP07949 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.84□□□□□ -1.79
RETP07949 TCEA1P2-201ENST00000420496 906 ntBASIC3.84□□□□□ -1.79
RETP07949 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.84□□□□□ -1.79
RETP07949 MTCO1P52-201ENST00000433928 531 ntBASIC3.84□□□□□ -1.79
RETP07949 AC092641.1-201ENST00000440229 772 ntBASIC3.84□□□□□ -1.79
RETP07949 RPS3AP46-201ENST00000448352 682 ntBASIC3.84□□□□□ -1.79
RETP07949 SNORD108-201ENST00000459332 71 ntBASIC3.84□□□□□ -1.79
RETP07949 AP000873.1-201ENST00000463987 400 ntBASIC3.84□□□□□ -1.79
RETP07949 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.84□□□□□ -1.79
RETP07949 RN7SL807P-201ENST00000470923 297 ntBASIC3.84□□□□□ -1.79
RETP07949 AL049873.1-201ENST00000480540 376 ntBASIC3.84□□□□□ -1.79
RETP07949 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.84□□□□□ -1.79
RETP07949 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.84□□□□□ -1.79
RETP07949 RNA5SP164-201ENST00000516533 110 ntBASIC3.84□□□□□ -1.79
RETP07949 RN7SKP289-201ENST00000517244 295 ntBASIC3.84□□□□□ -1.79
RETP07949 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.84□□□□□ -1.79
RETP07949 NPM1P47-201ENST00000560843 856 ntBASIC3.84□□□□□ -1.79
RETP07949 AC022968.1-201ENST00000567372 442 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms