Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC007423.1-201ENST00000605009 627 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC024941.1-201ENST00000612250 334 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC079684.1-201ENST00000621405 437 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC067852.7-201ENST00000623270 535 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 CFTRP2-201ENST00000634304 199 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AF001550.2-201ENST00000636643 217 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 Z73965.1-201ENST00000623412 2297 ntBASIC3.27□□□□□ -1.89
HLA-DPB1P04440 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DPB1P04440 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 RNA5SP42-201ENST00000364278 115 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 MIR30B-201ENST00000384850 88 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 RPS6P12-201ENST00000432491 726 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AL590762.3-201ENST00000436372 640 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 RPL7P29-201ENST00000437151 728 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC074367.1-201ENST00000438685 1125 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 ELOCP3-201ENST00000439303 348 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 ANP32BP2-201ENST00000454525 545 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC010683.1-201ENST00000473673 378 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AL139099.1-201ENST00000497398 403 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 PRELID3BP7-201ENST00000503606 469 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 NDUFB9P3-201ENST00000521269 501 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC025918.2-201ENST00000558683 763 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 BNIP3P38-201ENST00000601117 544 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC069304.3-201ENST00000603938 1084 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AL021368.1-201ENST00000607490 540 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC099676.1-201ENST00000608886 657 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AL354798.1-201ENST00000622505 329 ntBASIC3.26□□□□□ -1.89
HLA-DPB1P04440 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DPB1P04440 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AL592437.2-201ENST00000421655 2434 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 SAGE2P-201ENST00000420011 2126 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RNU6-1279P-201ENST00000383917 103 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RNU6-796P-201ENST00000391086 107 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 HMGB1P10-201ENST00000395823 563 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 ZNF602P-201ENST00000405929 924 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 MTATP6P31-201ENST00000406985 692 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 SNORA3.3-201ENST00000408712 125 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RNU2-6P-201ENST00000411404 190 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AL390879.2-203ENST00000426943 1121 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 ELOCP11-201ENST00000436690 332 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 TXNP1-201ENST00000441872 371 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 ELOCP16-201ENST00000444494 332 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RPS3AP46-201ENST00000448352 682 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC104687.1-201ENST00000485829 412 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RPL30P11-201ENST00000495304 339 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC023050.1-201ENST00000498198 304 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC010285.3-201ENST00000511668 676 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DPB1P04440 AC026402.1-201ENST00000513642 170 ntBASIC3.25□□□□□ -1.89
HLA-DPB1P04440 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms