Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 uc_338.15-201ENST00000615470 191 ntBASIC5.9□□□□□ -1.46
PDGFAP04085 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFAP04085 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.9□□□□□ -1.47
PDGFAP04085 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.9□□□□□ -1.47
PDGFAP04085 AC119674.1-204ENST00000641348 1343 ntBASIC5.9□□□□□ -1.47
PDGFAP04085 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
PDGFAP04085 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.9□□□□□ -1.47
PDGFAP04085 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.9□□□□□ -1.47
PDGFAP04085 AP000756.2-201ENST00000624168 2567 ntBASIC5.9□□□□□ -1.47
PDGFAP04085 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
PDGFAP04085 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 Z95327.2-201ENST00000414579 1873 ntBASIC5.9□□□□□ -1.47
PDGFAP04085 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
PDGFAP04085 AP001350.1-201ENST00000601906 1524 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 NXPH1-205ENST00000602349 1953 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AC004158.1-201ENST00000564508 4319 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDGFAP04085 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFAP04085 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDGFAP04085 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFAP04085 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFAP04085 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 Y_RNA.216-201ENST00000364205 93 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 SNORA17A-201ENST00000391185 133 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AL359634.1-202ENST00000404721 284 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 RNU2-50P-201ENST00000410494 143 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 RNA5SP345-201ENST00000410646 108 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.89□□□□□ -1.47
PDGFAP04085 MRPS21P2-201ENST00000424704 264 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC023141.3-201ENST00000436698 278 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 ATP5LP2-201ENST00000440646 311 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 PPIAP7-201ENST00000454070 489 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 SNORD121B-201ENST00000458838 81 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AC090096.1-201ENST00000489168 390 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC016559.2-201ENST00000510759 359 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.89□□□□□ -1.47
PDGFAP04085 AP000859.1-201ENST00000525536 307 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AP000620.1-201ENST00000527147 504 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AP005435.4-201ENST00000529514 284 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 OR5B10P-201ENST00000532869 642 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 ELOCP31-201ENST00000540463 467 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC090651.1-201ENST00000567865 634 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 MIR4775-201ENST00000581168 75 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.89□□□□□ -1.47
PDGFAP04085 RN7SL404P-201ENST00000582421 281 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFAP04085 RPL12P48-201ENST00000605620 304 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AL121655.1-201ENST00000605811 308 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 Z98200.1-201ENST00000607298 470 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AC040896.1-201ENST00000613819 479 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 FAM27E2-201ENST00000619668 403 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 AC040168.1-201ENST00000623594 991 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFAP04085 AP000843.1-201ENST00000624880 701 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 SNORA17.5-201ENST00000630429 132 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDGFAP04085 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDGFAP04085 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.89□□□□□ -1.47
PDGFAP04085 AC005725.1-201ENST00000577346 2607 ntBASIC5.89□□□□□ -1.47
PDGFAP04085 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PDGFAP04085 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDGFAP04085 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.89□□□□□ -1.47
PDGFAP04085 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 AC087516.1-201ENST00000561236 2428 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AL442128.2-201ENST00000620246 1824 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.88□□□□□ -1.47
PDGFAP04085 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.88□□□□□ -1.47
PDGFAP04085 AC009229.4-201ENST00000623854 1947 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PDGFAP04085 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDGFAP04085 AL139276.1-201ENST00000311910 1001 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 MIR369-201ENST00000362155 70 ntBASIC5.88□□□□□ -1.47
PDGFAP04085 RNU6-474P-201ENST00000384243 107 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms