Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 RNU5E-10P-201ENST00000363506 118 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 RNA5SP447-201ENST00000363749 119 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MT-ND1P03886 MCTS2P-201ENST00000394552 546 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 SNORA11C-201ENST00000408532 129 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 ELOCP19-201ENST00000411919 318 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC092638.1-201ENST00000411966 1275 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AMD1P2-201ENST00000412936 992 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.77□□□□□ -1.81
MT-ND1P03886 SFR1P2-201ENST00000421841 730 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MT-ND1P03886 RPS27AP7-201ENST00000422792 455 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 IFNNP1-201ENST00000429219 553 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AL358472.1-201ENST00000431295 329 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 RRM2P4-201ENST00000441721 562 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC004865.1-201ENST00000442276 1003 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 RPL23AP15-201ENST00000450202 459 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AP000873.1-201ENST00000463987 400 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 UBE2V1P12-201ENST00000503954 474 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AC008958.1-201ENST00000511047 682 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 RNU4-60P-201ENST00000517239 135 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AP001207.2-201ENST00000519490 539 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AC021451.1-201ENST00000523498 1129 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC137768.1-201ENST00000549998 553 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AL049838.1-201ENST00000563647 981 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AL139286.1-201ENST00000604465 483 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 AC121761.2-201ENST00000617300 689 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 AL121890.3-201ENST00000618494 516 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.77□□□□□ -1.81
MT-ND1P03886 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MT-ND1P03886 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
MT-ND1P03886 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.77□□□□□ -1.81
MT-ND1P03886 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MT-ND1P03886 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.77□□□□□ -1.81
MT-ND1P03886 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 MTND5P3-201ENST00000438536 1800 ntBASIC3.77□□□□□ -1.81
MT-ND1P03886 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 AC106754.1-201ENST00000562632 1513 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 UBE3AP2-201ENST00000429033 2259 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.76□□□□□ -1.81
MT-ND1P03886 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 AC103591.2-201ENST00000265259 766 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 CYB5AP4-201ENST00000396692 399 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 RNU6-584P-201ENST00000410350 95 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 VN1R51P-201ENST00000411675 945 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 MTCO2P8-201ENST00000412213 658 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.76□□□□□ -1.81
MT-ND1P03886 CHIAP3-201ENST00000423668 1133 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.76□□□□□ -1.81
MT-ND1P03886 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.76□□□□□ -1.81
MT-ND1P03886 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.76□□□□□ -1.81
MT-ND1P03886 RPS3AP54-201ENST00000435535 734 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.76□□□□□ -1.81
MT-ND1P03886 PPIAP17-201ENST00000438507 471 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 OR51B8P-201ENST00000449892 769 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.76□□□□□ -1.81
MT-ND1P03886 DNAJC19P8-201ENST00000452887 259 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 snoU13.1-201ENST00000459157 104 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 RPS4XP6-201ENST00000477670 797 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 RPL29P14-201ENST00000495837 428 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.76□□□□□ -1.81
MT-ND1P03886 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MT-ND1P03886 AC093755.1-201ENST00000512950 1023 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.76□□□□□ -1.81
MT-ND1P03886 AC010376.1-201ENST00000522101 334 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 OR6C73P-201ENST00000546432 358 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.76□□□□□ -1.81
MT-ND1P03886 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.76□□□□□ -1.81
MT-ND1P03886 AC011611.5-201ENST00000552477 578 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AC007424.1-203ENST00000554613 687 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AC099489.2-201ENST00000574976 260 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.76□□□□□ -1.81
MT-ND1P03886 AL713922.2-201ENST00000619384 716 ntBASIC3.76□□□□□ -1.81
MT-ND1P03886 MIR6730-201ENST00000622213 67 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms