Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.17□□□□□ -1.58
COL3A1P02461 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.17□□□□□ -1.58
COL3A1P02461 AC068135.2-201ENST00000569293 1028 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 AC107982.3-201ENST00000584957 985 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 MIR4719-201ENST00000585233 84 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 AC099785.1-201ENST00000605697 437 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 AC080013.4-201ENST00000607624 649 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 AC096586.2-201ENST00000610260 441 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 AC121761.2-201ENST00000617300 689 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 MIR6075-201ENST00000620782 95 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 AC015722.2-201ENST00000622210 551 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 AP003072.4-201ENST00000624580 310 ntBASIC5.17□□□□□ -1.58
COL3A1P02461 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL3A1P02461 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL3A1P02461 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL3A1P02461 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL3A1P02461 SMG1P4-204ENST00000523028 4131 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 AL442128.2-201ENST00000620246 1824 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 ZNF876P-202ENST00000398732 1485 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL3A1P02461 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
COL3A1P02461 RNU6-468P-201ENST00000384003 109 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 MIR1251-201ENST00000408552 70 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 CYCSP10-201ENST00000417973 294 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.16□□□□□ -1.58
COL3A1P02461 RPL34P26-201ENST00000445636 354 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 AC022336.1-201ENST00000475510 337 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.16□□□□□ -1.58
COL3A1P02461 AC113420.1-201ENST00000507903 571 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 AC008802.1-201ENST00000519121 791 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 AP003461.1-201ENST00000528866 78 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.16□□□□□ -1.58
COL3A1P02461 MTCO2P15-201ENST00000532655 656 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.16□□□□□ -1.58
COL3A1P02461 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.16□□□□□ -1.58
COL3A1P02461 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.16□□□□□ -1.58
COL3A1P02461 AC095057.3-201ENST00000567102 1157 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 AC124283.4-201ENST00000581815 456 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 MIMT1-201ENST00000597105 1050 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 AL021997.1-201ENST00000605757 193 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 RNU1-30P-201ENST00000606575 163 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 AC079298.2-201ENST00000623885 459 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.16□□□□□ -1.58
COL3A1P02461 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL3A1P02461 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.16□□□□□ -1.58
COL3A1P02461 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 UBE3AP2-201ENST00000429033 2259 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 AP002001.2-201ENST00000529025 1469 ntBASIC5.16□□□□□ -1.58
COL3A1P02461 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL3A1P02461 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
COL3A1P02461 AC092435.4-201ENST00000623012 4159 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
COL3A1P02461 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL3A1P02461 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL3A1P02461 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
COL3A1P02461 RNU4-68P-201ENST00000364314 141 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 RNU6-867P-201ENST00000364956 107 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL3A1P02461 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
COL3A1P02461 TRAV35-201ENST00000390462 330 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 RPS3AP26-201ENST00000398259 784 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.15□□□□□ -1.58
COL3A1P02461 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.15□□□□□ -1.58
COL3A1P02461 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.15□□□□□ -1.58
COL3A1P02461 IFNNP1-201ENST00000429219 553 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 AC098826.1-201ENST00000433943 471 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 AL133547.1-201ENST00000448546 220 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.15□□□□□ -1.58
COL3A1P02461 AC093853.1-201ENST00000515689 483 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.15□□□□□ -1.58
COL3A1P02461 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL3A1P02461 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.15□□□□□ -1.58
COL3A1P02461 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.15□□□□□ -1.58
COL3A1P02461 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.15□□□□□ -1.58
COL3A1P02461 DPRXP4-201ENST00000578053 568 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.15□□□□□ -1.58
COL3A1P02461 AC005242.1-201ENST00000585658 438 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 FAM60CP-201ENST00000591086 664 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.15□□□□□ -1.58
COL3A1P02461 AC015849.2-201ENST00000605738 409 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 AC092794.1-201ENST00000612734 582 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.15□□□□□ -1.58
COL3A1P02461 AC103706.2-201ENST00000638080 240 ntBASIC5.15□□□□□ -1.58
COL3A1P02461 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL3A1P02461 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms