Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.53□□□□□ -1.84
SEMA3DO95025 RN7SKP141-201ENST00000516167 338 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 RN7SKP21-201ENST00000516503 220 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.53□□□□□ -1.84
SEMA3DO95025 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.53□□□□□ -1.84
SEMA3DO95025 AC008083.2-201ENST00000546707 476 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC023158.1-201ENST00000561632 1025 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 MIR4697-201ENST00000582977 78 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
SEMA3DO95025 AL451086.1-201ENST00000605596 223 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.53□□□□□ -1.84
SEMA3DO95025 AC135803.1-201ENST00000608748 565 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AL592295.2-201ENST00000612578 206 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC243654.2-201ENST00000612843 443 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 AC068724.3-201ENST00000625906 87 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SEMA3DO95025 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SEMA3DO95025 RNF6P1-201ENST00000444889 1784 ntBASIC3.53□□□□□ -1.84
SEMA3DO95025 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SEMA3DO95025 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.53□□□□□ -1.84
SEMA3DO95025 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SEMA3DO95025 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
SEMA3DO95025 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
SEMA3DO95025 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SEMA3DO95025 FAM91A3P-201ENST00000456826 2544 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SEMA3DO95025 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SEMA3DO95025 OR4A15-201ENST00000314706 1035 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SEMA3DO95025 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SEMA3DO95025 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.52□□□□□ -1.85
SEMA3DO95025 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 RN7SKP156-201ENST00000410308 342 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 RN7SKP263-201ENST00000411194 309 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.52□□□□□ -1.85
SEMA3DO95025 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC006989.1-201ENST00000427212 131 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 RSL24D1P2-201ENST00000445584 366 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AP000926.4-201ENST00000527351 454 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AL389895.1-201ENST00000554127 252 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 AC245128.3-201ENST00000594721 748 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 AC067959.1-201ENST00000604334 379 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 AL365503.1-201ENST00000605247 905 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 RNU1-30P-201ENST00000606575 163 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 AL355816.1-201ENST00000607951 118 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.52□□□□□ -1.85
SEMA3DO95025 RNVU1-4-201ENST00000612985 164 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.52□□□□□ -1.85
SEMA3DO95025 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
SEMA3DO95025 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SEMA3DO95025 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 ZNF33CP-201ENST00000432492 2030 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SEMA3DO95025 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 AC083799.1-201ENST00000366451 910 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 RPL32P23-201ENST00000397237 405 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC013404.1-201ENST00000413068 249 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 MTND2P15-201ENST00000418575 892 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AL139247.1-201ENST00000422768 325 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.51□□□□□ -1.85
SEMA3DO95025 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.51□□□□□ -1.85
SEMA3DO95025 RPL23AP12-201ENST00000467573 473 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC103987.1-201ENST00000473394 348 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 NPM1P17-201ENST00000479221 602 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.51□□□□□ -1.85
SEMA3DO95025 RPL23AP73-201ENST00000492507 471 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.51□□□□□ -1.85
SEMA3DO95025 RNU6-579P-201ENST00000516879 102 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.51□□□□□ -1.85
SEMA3DO95025 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.51□□□□□ -1.85
SEMA3DO95025 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEMA3DO95025 OR5D17P-201ENST00000531492 978 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.51□□□□□ -1.85
SEMA3DO95025 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.51□□□□□ -1.85
SEMA3DO95025 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.51□□□□□ -1.85
SEMA3DO95025 HSPE1P5-201ENST00000561489 272 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 MTATP6P25-201ENST00000574491 261 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 MIR5685-201ENST00000579080 79 ntBASIC3.51□□□□□ -1.85
SEMA3DO95025 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.51□□□□□ -1.85
SEMA3DO95025 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.51□□□□□ -1.85
SEMA3DO95025 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms