Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-157P-201ENST00000383957 107 ntBASIC3.98□□□□□ -1.77
PRKNO60260 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 RPL6P29-201ENST00000414863 865 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.98□□□□□ -1.77
PRKNO60260 AC234782.4-201ENST00000417646 1048 ntBASIC3.98□□□□□ -1.77
PRKNO60260 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 PAICSP7-201ENST00000419829 962 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC092017.2-201ENST00000427600 362 ntBASIC3.98□□□□□ -1.77
PRKNO60260 MTCO1P54-201ENST00000430139 712 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AL365396.1-201ENST00000430854 671 ntBASIC3.98□□□□□ -1.77
PRKNO60260 SEPT7P5-201ENST00000434048 306 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC092393.1-201ENST00000439625 742 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC093155.1-201ENST00000440164 826 ntBASIC3.98□□□□□ -1.77
PRKNO60260 ELOCP10-201ENST00000440624 327 ntBASIC3.98□□□□□ -1.77
PRKNO60260 HMGB3P9-201ENST00000441799 583 ntBASIC3.98□□□□□ -1.77
PRKNO60260 EEF1A1P1-201ENST00000447052 739 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 RPL21P134-201ENST00000453468 483 ntBASIC3.98□□□□□ -1.77
PRKNO60260 PPIAP21-201ENST00000464473 501 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC108734.3-201ENST00000481241 1165 ntBASIC3.98□□□□□ -1.77
PRKNO60260 RPS27P23-201ENST00000487608 251 ntBASIC3.98□□□□□ -1.77
PRKNO60260 DEFB109F-201ENST00000491870 277 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC108022.1-201ENST00000493466 478 ntBASIC3.98□□□□□ -1.77
PRKNO60260 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 AC113430.1-201ENST00000506872 718 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC021146.8-201ENST00000507455 733 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 SNORA31.9-201ENST00000516429 84 ntBASIC3.98□□□□□ -1.77
PRKNO60260 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 AC090151.1-201ENST00000520784 730 ntBASIC3.98□□□□□ -1.77
PRKNO60260 MTCO1P47-201ENST00000523889 1271 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 AC022882.1-201ENST00000532142 501 ntBASIC3.98□□□□□ -1.77
PRKNO60260 DUXAP1-201ENST00000556632 463 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 RN7SL176P-201ENST00000580352 264 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.98□□□□□ -1.77
PRKNO60260 VN1R84P-201ENST00000593697 235 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC123786.2-201ENST00000603459 275 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AL031281.1-201ENST00000604049 488 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC133552.5-201ENST00000604266 540 ntBASIC3.98□□□□□ -1.77
PRKNO60260 ELOCP34-201ENST00000604436 327 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC010200.2-201ENST00000605098 235 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AL158042.1-201ENST00000605338 460 ntBASIC3.98□□□□□ -1.77
PRKNO60260 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRKNO60260 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.98□□□□□ -1.77
PRKNO60260 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.98□□□□□ -1.77
PRKNO60260 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.98□□□□□ -1.77
PRKNO60260 AL592182.3-201ENST00000642132 3304 ntBASIC3.98□□□□□ -1.77
PRKNO60260 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 MAPK10-349ENST00000641767 3661 ntBASIC3.98□□□□□ -1.77
PRKNO60260 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.97□□□□□ -1.77
PRKNO60260 MAPK10-304ENST00000641341 3984 ntBASIC3.97□□□□□ -1.77
PRKNO60260 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PRKNO60260 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PRKNO60260 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PRKNO60260 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 AC067945.1-201ENST00000342609 618 ntBASIC3.97□□□□□ -1.77
PRKNO60260 RNU1-14P-201ENST00000362759 152 ntBASIC3.97□□□□□ -1.77
PRKNO60260 RNU6-619P-201ENST00000365146 108 ntBASIC3.97□□□□□ -1.77
PRKNO60260 FABP12P1-201ENST00000401911 322 ntBASIC3.97□□□□□ -1.77
PRKNO60260 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.97□□□□□ -1.77
PRKNO60260 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 USP9YP26-201ENST00000421008 661 ntBASIC3.97□□□□□ -1.77
PRKNO60260 MRPS36P1-201ENST00000421291 307 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.97□□□□□ -1.77
PRKNO60260 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.97□□□□□ -1.77
PRKNO60260 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AL158073.1-201ENST00000426848 1104 ntBASIC3.97□□□□□ -1.77
PRKNO60260 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 ATP5F1P1-201ENST00000433775 569 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 USP9YP22-201ENST00000438971 294 ntBASIC3.97□□□□□ -1.77
PRKNO60260 MTND3P1-201ENST00000441336 220 ntBASIC3.97□□□□□ -1.77
PRKNO60260 TPMTP4-201ENST00000450749 678 ntBASIC3.97□□□□□ -1.77
PRKNO60260 EIF4A1P11-201ENST00000451239 222 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AL354710.1-201ENST00000453641 246 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AL133477.1-201ENST00000457472 514 ntBASIC3.97□□□□□ -1.77
PRKNO60260 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.97□□□□□ -1.77
PRKNO60260 AC103987.1-201ENST00000473394 348 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC022795.1-201ENST00000473808 480 ntBASIC3.97□□□□□ -1.77
PRKNO60260 VPS26AP1-201ENST00000483197 979 ntBASIC3.97□□□□□ -1.77
PRKNO60260 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms