Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 NF1P3-201ENST00000457709 450 ntBASIC4.11□□□□□ -1.75
TO15178 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.11□□□□□ -1.75
TO15178 AC011979.1-201ENST00000472300 483 ntBASIC4.11□□□□□ -1.75
TO15178 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.11□□□□□ -1.75
TO15178 BOLA3P3-201ENST00000505182 232 ntBASIC4.11□□□□□ -1.75
TO15178 SNX5P1-201ENST00000505757 1041 ntBASIC4.11□□□□□ -1.75
TO15178 AC020593.1-201ENST00000507399 299 ntBASIC4.11□□□□□ -1.75
TO15178 AC090071.1-201ENST00000507713 644 ntBASIC4.11□□□□□ -1.75
TO15178 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 AC015795.1-201ENST00000513669 327 ntBASIC4.11□□□□□ -1.75
TO15178 AC092593.2-201ENST00000513866 913 ntBASIC4.11□□□□□ -1.75
TO15178 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.11□□□□□ -1.75
TO15178 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.11□□□□□ -1.75
TO15178 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.11□□□□□ -1.75
TO15178 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.11□□□□□ -1.75
TO15178 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.11□□□□□ -1.75
TO15178 CBX3P5-201ENST00000552017 521 ntBASIC4.11□□□□□ -1.75
TO15178 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.11□□□□□ -1.75
TO15178 AADACP1-206ENST00000561502 1193 ntBASIC4.11□□□□□ -1.75
TO15178 AC093519.1-201ENST00000566109 298 ntBASIC4.11□□□□□ -1.75
TO15178 MIR5096-201ENST00000583713 70 ntBASIC4.11□□□□□ -1.75
TO15178 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.11□□□□□ -1.75
TO15178 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.11□□□□□ -1.75
TO15178 AC020634.1-201ENST00000608701 549 ntBASIC4.11□□□□□ -1.75
TO15178 AC140725.3-201ENST00000616193 880 ntBASIC4.11□□□□□ -1.75
TO15178 AC008147.4-201ENST00000617570 1204 ntBASIC4.11□□□□□ -1.75
TO15178 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.11□□□□□ -1.75
TO15178 AL356863.1-201ENST00000623378 1080 ntBASIC4.11□□□□□ -1.75
TO15178 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.11□□□□□ -1.75
TO15178 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 NOL8P1-201ENST00000508336 3529 ntBASIC4.11□□□□□ -1.75
TO15178 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TO15178 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TO15178 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TO15178 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TO15178 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TO15178 MIR195-201ENST00000385194 87 ntBASIC4.1□□□□□ -1.75
TO15178 AL161909.1-201ENST00000397390 712 ntBASIC4.1□□□□□ -1.75
TO15178 ELOCP19-201ENST00000411919 318 ntBASIC4.1□□□□□ -1.75
TO15178 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.1□□□□□ -1.75
TO15178 RPL22P18-201ENST00000417197 377 ntBASIC4.1□□□□□ -1.75
TO15178 UBTFL3-201ENST00000418934 1024 ntBASIC4.1□□□□□ -1.75
TO15178 MRPS36P1-201ENST00000421291 307 ntBASIC4.1□□□□□ -1.75
TO15178 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
TO15178 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.1□□□□□ -1.75
TO15178 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.1□□□□□ -1.75
TO15178 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 USP9YP7-201ENST00000436723 430 ntBASIC4.1□□□□□ -1.75
TO15178 YWHAZP8-201ENST00000436935 731 ntBASIC4.1□□□□□ -1.75
TO15178 AL591719.1-201ENST00000444669 744 ntBASIC4.1□□□□□ -1.75
TO15178 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.1□□□□□ -1.75
TO15178 AC004022.1-201ENST00000447766 1066 ntBASIC4.1□□□□□ -1.75
TO15178 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.1□□□□□ -1.75
TO15178 USP9YP32-201ENST00000452432 430 ntBASIC4.1□□□□□ -1.75
TO15178 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.1□□□□□ -1.75
TO15178 DHFRP3-201ENST00000455595 559 ntBASIC4.1□□□□□ -1.75
TO15178 snoU13.1-201ENST00000459157 104 ntBASIC4.1□□□□□ -1.75
TO15178 RPL37P6-202ENST00000464216 403 ntBASIC4.1□□□□□ -1.75
TO15178 UBTFL6-201ENST00000477929 1024 ntBASIC4.1□□□□□ -1.75
TO15178 AC108734.3-201ENST00000481241 1165 ntBASIC4.1□□□□□ -1.75
TO15178 AC090013.1-201ENST00000485147 480 ntBASIC4.1□□□□□ -1.75
TO15178 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AC025674.1-201ENST00000507074 324 ntBASIC4.1□□□□□ -1.75
TO15178 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AC093755.1-201ENST00000512950 1023 ntBASIC4.1□□□□□ -1.75
TO15178 IGHV3-32-201ENST00000519182 355 ntBASIC4.1□□□□□ -1.75
TO15178 AC087808.1-201ENST00000520501 361 ntBASIC4.1□□□□□ -1.75
TO15178 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.1□□□□□ -1.75
TO15178 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AL352979.3-201ENST00000553515 247 ntBASIC4.1□□□□□ -1.75
TO15178 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 EIF5A2P1-201ENST00000564027 460 ntBASIC4.1□□□□□ -1.75
TO15178 RPL23AP97-201ENST00000568955 471 ntBASIC4.1□□□□□ -1.75
TO15178 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.1□□□□□ -1.75
TO15178 AC022662.1-201ENST00000580252 331 ntBASIC4.1□□□□□ -1.75
TO15178 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.1□□□□□ -1.75
TO15178 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.1□□□□□ -1.75
TO15178 AL390838.2-201ENST00000602394 274 ntBASIC4.1□□□□□ -1.75
TO15178 AC068790.5-201ENST00000602741 355 ntBASIC4.1□□□□□ -1.75
TO15178 AC025946.2-201ENST00000603398 234 ntBASIC4.1□□□□□ -1.75
TO15178 AC079587.1-201ENST00000603846 277 ntBASIC4.1□□□□□ -1.75
TO15178 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.1□□□□□ -1.75
TO15178 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TO15178 AC011330.2-201ENST00000621680 635 ntBASIC4.1□□□□□ -1.75
TO15178 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TO15178 NMD3P1-201ENST00000439704 1488 ntBASIC4.1□□□□□ -1.75
TO15178 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms