Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC116353.3-201ENST00000511215 249 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AC018797.3-201ENST00000513388 1241 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 MRPS33P3-201ENST00000513456 322 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 SNORA48.10-201ENST00000516965 160 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM38O00635 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC016727.1-205ENST00000605437 569 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 SNORD91B-202ENST00000608459 222 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AC017083.3-201ENST00000609955 700 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AC097505.1-201ENST00000610199 565 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 AC012414.7-202ENST00000622705 1090 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 AF001550.2-201ENST00000636643 217 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM38O00635 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM38O00635 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM38O00635 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM38O00635 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM38O00635 AC104118.1-201ENST00000607625 1589 ntBASIC4.87□□□□□ -1.63
TRIM38O00635 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 OR4A15-201ENST00000314706 1035 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM38O00635 RNU6-1214P-201ENST00000363650 109 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AP000580.1-201ENST00000404439 358 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 RNU2-21P-201ENST00000410368 188 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 MTCO3P1-205ENST00000422088 832 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 MTCYBP5-201ENST00000423752 1135 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AL138785.1-201ENST00000425821 331 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM38O00635 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 FGF7P5-201ENST00000441829 291 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 MTCYBP3-201ENST00000445588 1137 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 OR1H1P-201ENST00000448731 937 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM38O00635 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM38O00635 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM38O00635 RN7SL441P-201ENST00000492388 296 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 SNX5P1-201ENST00000505757 1041 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 MTATP6P22-201ENST00000507369 598 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AC090071.1-201ENST00000507713 644 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 NDUFB4P12-201ENST00000513465 390 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM38O00635 RN7SKP31-201ENST00000516354 278 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 RNU6-1261P-201ENST00000517194 104 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM38O00635 IGKV1-32-201ENST00000519290 311 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AP001880.2-201ENST00000538233 448 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM38O00635 AC124068.1-201ENST00000563131 678 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM38O00635 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM38O00635 OR2AS2P-201ENST00000606902 342 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM38O00635 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 AC007671.2-201ENST00000637344 619 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 OR8B1P-202ENST00000641132 1178 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 AC107982.1-201ENST00000507171 1300 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM38O00635 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 AP000776.1-201ENST00000530032 1663 ntBASIC4.86□□□□□ -1.63
TRIM38O00635 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM38O00635 AC000123.3-201ENST00000624029 4975 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AL139811.1-201ENST00000424779 2299 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM38O00635 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM38O00635 RNU6-694P-201ENST00000364071 147 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 SNORA62-201ENST00000365493 153 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 RNU6-921P-201ENST00000384361 107 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 RNA5SP332-201ENST00000391063 115 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM38O00635 AL355379.1-201ENST00000405542 640 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AL356131.1-201ENST00000405826 414 ntBASIC4.85□□□□□ -1.63
TRIM38O00635 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms