Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AP000580.1-201ENST00000404439 358 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 NCSTNP1-201ENST00000406229 144 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 FAR2P2-201ENST00000413041 594 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 FAR2P4-202ENST00000425399 584 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 C8orf59P1-201ENST00000429930 303 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 NRBF2P3-201ENST00000432731 865 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AL451139.1-201ENST00000434718 346 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC004938.1-201ENST00000438468 308 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 ST13P20-201ENST00000447996 1065 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 RPL18AP17-201ENST00000455326 198 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 RNU6-1218P-201ENST00000458990 108 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC090013.1-201ENST00000485147 480 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC234771.5-201ENST00000600161 514 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC083899.3-201ENST00000603413 594 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AL121932.1-201ENST00000605542 214 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC068276.1-201ENST00000605793 379 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC239868.4-201ENST00000608318 671 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 MIR6780A-201ENST00000615089 68 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC074140.1-201ENST00000621617 208 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC116563.2-201ENST00000624751 535 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 TLK1P1-201ENST00000456760 2440 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 AC092079.1-201ENST00000558620 1985 ntBASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTPDC1A2A3K4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC019072.1-201ENST00000604535 1551 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC107068.1-201ENST00000563286 4218 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 RNU4-91P-201ENST00000364778 135 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 RNA5SP88-201ENST00000365560 109 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 RNU6-1119P-201ENST00000384349 108 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 RNU6-1122P-201ENST00000384449 107 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 Y_RNA.517-201ENST00000384551 106 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 RNY3P10-201ENST00000384764 102 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 DEFB108C-201ENST00000400154 252 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC016397.1-201ENST00000412463 242 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC119751.6-201ENST00000416712 186 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL121878.1-201ENST00000418638 859 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC233981.1-201ENST00000423224 461 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC093698.1-201ENST00000423843 571 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 B3GNT2P1-201ENST00000434960 952 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 NMNAT1P2-201ENST00000435192 860 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 UBE2FP3-201ENST00000436366 524 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 RPL36AP15-201ENST00000444514 266 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL031584.1-201ENST00000447169 754 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC009220.1-201ENST00000451614 275 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 MTCYBP1-201ENST00000454315 1119 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL591473.1-201ENST00000464297 313 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC011005.3-201ENST00000491624 395 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC239860.2-201ENST00000525886 270 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 GSTP1P1-201ENST00000548078 319 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC017100.2-201ENST00000584628 355 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC087683.1-201ENST00000591187 441 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC073648.5-201ENST00000603502 305 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC007497.1-201ENST00000610421 561 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC073968.1-201ENST00000618594 637 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 CR392039.4-201ENST00000624968 501 ntBASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 AC025048.6-202ENST00000627667 438 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms