Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC009852.2-201ENST00000567898 485 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AP001004.1-201ENST00000582468 324 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC110743.1-201ENST00000584870 478 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC006272.2-201ENST00000594725 163 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC234771.5-201ENST00000600161 514 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC079089.3-201ENST00000603094 673 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL161616.1-201ENST00000611867 286 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL627230.1-201ENST00000613077 211 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL591926.8-201ENST00000616876 211 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL356596.1-201ENST00000624230 379 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 MIR7641-1-201ENST00000627518 61 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC073869.10-201ENST00000642016 354 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 OR4G11P-202ENST00000642116 1414 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC004817.4-201ENST00000602396 3625 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 MTND4P26-201ENST00000415971 1359 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 OR9K1P-202ENST00000641111 3217 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 ATG4AP1-201ENST00000416893 538 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC096632.1-201ENST00000427395 310 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 YWHAZP8-201ENST00000436935 731 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 RPL23AP16-201ENST00000441715 421 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 CDC27P1-201ENST00000445384 715 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 COX6CP12-201ENST00000446748 202 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 VN1R10P-201ENST00000447106 875 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 RPL39P6-201ENST00000448289 150 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 RPL30P9-201ENST00000465586 330 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 RN7SL481P-201ENST00000477764 299 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC012414.6-201ENST00000568241 401 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC209154.1-201ENST00000582156 337 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL359535.1-201ENST00000612100 1087 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC100793.4-201ENST00000613683 429 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC022306.2-201ENST00000617563 647 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 MIR7703-201ENST00000620784 77 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL359740.1-201ENST00000624340 592 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC135352.1-201ENST00000506173 1418 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC107027.3-201ENST00000565095 3473 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AL603750.1-201ENST00000624216 1717 ntBASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PCDHB1Q9Y5F3 AC063976.2-201ENST00000425667 3556 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 RNU6-984P-201ENST00000363236 109 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 RNU6-657P-201ENST00000383904 107 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 RNU6-398P-201ENST00000384143 109 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 RNU6-921P-201ENST00000384361 107 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 SNORA11-201ENST00000408789 128 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms