Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 RNU6-1200P-201ENST00000384162 107 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKP3Q9Y446 TPT1P2-201ENST00000413105 503 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 LUZP4P1-201ENST00000415420 344 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC119751.6-201ENST00000416712 186 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC092634.6-201ENST00000418558 192 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 UQCRBP1-201ENST00000421129 336 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 RAD23BP1-201ENST00000421404 1227 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 MTCO3P1-205ENST00000422088 832 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AL022400.1-201ENST00000423946 935 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 AL031736.2-201ENST00000426573 787 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC010881.1-201ENST00000433830 235 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 MTND4P32-201ENST00000437189 1237 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AL606662.1-201ENST00000445763 553 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC012671.1-201ENST00000451912 203 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 OR5BM1P-201ENST00000512021 366 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 SNORA48.10-201ENST00000516965 160 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 RNU6-1261P-201ENST00000517194 104 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 CYCSP28-201ENST00000534284 321 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC015726.1-201ENST00000602353 681 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 BPIFA4P-203ENST00000603168 689 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AL358072.1-201ENST00000604156 575 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 AL353600.1-201ENST00000608148 251 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC072039.2-201ENST00000608883 439 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC009090.3-201ENST00000616553 565 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 AC005086.4-201ENST00000623065 213 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PKP3Q9Y446 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 CDR1-202ENST00000625883 1485 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 DHX40P1-201ENST00000588725 1412 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PKP3Q9Y446 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKP3Q9Y446 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKP3Q9Y446 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PKP3Q9Y446 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PKP3Q9Y446 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PKP3Q9Y446 NXPH1-205ENST00000602349 1953 ntBASIC4.53□□□□□ -1.68
PKP3Q9Y446 LINC00622-201ENST00000562811 1570 ntBASIC4.53□□□□□ -1.69
PKP3Q9Y446 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKP3Q9Y446 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PKP3Q9Y446 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC093535.2-201ENST00000624769 2326 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC139769.1-204ENST00000472297 1931 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC012618.3-205ENST00000637896 1496 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 RNU6-444P-201ENST00000383988 108 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 RPS3AP23-201ENST00000401762 784 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 AL121978.1-201ENST00000402778 359 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 MTCO3P31-201ENST00000405526 789 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 CEACAMP8-201ENST00000413902 580 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 RPS25P9-201ENST00000435591 252 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 UBE2D3P4-201ENST00000441973 436 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 CCDC75P1-201ENST00000469247 791 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 RPL23AP72-201ENST00000492447 435 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 RNA5SP446-201ENST00000515955 82 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 RNU6-759P-201ENST00000516740 103 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC027309.2-201ENST00000520566 192 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKP3Q9Y446 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC135628.1-201ENST00000568867 534 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.52□□□□□ -1.69
PKP3Q9Y446 NF1P5-201ENST00000588287 448 ntBASIC4.52□□□□□ -1.69
PKP3Q9Y446 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms