Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 AL021877.2-201ENST00000624442 10684 ntBASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 RNA5SP305-201ENST00000362665 119 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 Y_RNA.146-201ENST00000363549 102 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 RPL35AP24-201ENST00000413846 330 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 BEND7P1-201ENST00000422058 457 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 DUTP6-201ENST00000425573 462 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AL356276.2-201ENST00000435919 558 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AL031663.1-201ENST00000437445 219 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 PPP1R11P1-201ENST00000486095 376 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC007686.1-201ENST00000488511 463 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AP001025.2-201ENST00000490908 477 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 SNORA58-201ENST00000505219 137 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-559P-201ENST00000516151 98 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 Y_RNA.711-201ENST00000516993 102 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 RNA5SP400-201ENST00000517155 111 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 GSTP1P1-201ENST00000548078 319 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 SULT1C2P2-201ENST00000562517 294 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AP001330.4-201ENST00000604350 154 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AL352984.2-202ENST00000613699 155 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AL445647.2-201ENST00000615170 130 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC100827.5-201ENST00000615883 426 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC040168.1-201ENST00000623594 991 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 CDRT1-208ENST00000630868 794 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC068769.1-201ENST00000474767 2426 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AC066616.2-201ENST00000559334 1481 ntBASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ZC3H4Q9UPT8 AP002370.1-201ENST00000528055 1602 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 AL512646.1-201ENST00000269395 1077 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 OR10R3P-201ENST00000361688 942 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-984P-201ENST00000363236 109 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-853P-201ENST00000364306 107 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-639P-201ENST00000384074 107 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RNU6-196P-201ENST00000384315 107 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 MIR141-201ENST00000384975 95 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 DHFRP6-201ENST00000401776 268 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 AL356057.3-201ENST00000402607 340 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RPL5P18-201ENST00000406671 891 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 AC245054.2-201ENST00000415639 319 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RPL7L1P9-201ENST00000431298 745 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 GPR143P-201ENST00000434155 205 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RPL23AP60-201ENST00000450011 454 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 CACYBPP2-201ENST00000453625 678 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 Y_RNA.639-201ENST00000458981 102 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 AC010301.1-201ENST00000473936 355 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 AC078785.3-201ENST00000476607 425 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 AC093267.1-201ENST00000489176 961 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 RPL38P4-201ENST00000502376 214 ntBASIC7.13□□□□□ -1.27
ZC3H4Q9UPT8 PGAM1P13-201ENST00000507497 754 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms