Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL732372.2-225ENST00000642124 456 ntBASIC8.39□□□□□ -1.07
PHF8Q9UPP1 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PHF8Q9UPP1 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AL161901.1-201ENST00000624954 3425 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AL136531.3-201ENST00000624378 3658 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ANAPC1P1-201ENST00000426186 2145 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC078880.4-201ENST00000617627 1749 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 SNORA64.1-201ENST00000362600 132 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 RNU6-1029P-201ENST00000384109 107 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 RNU6-39P-201ENST00000384344 107 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 UBE2V1P14-201ENST00000415815 558 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC012065.2-201ENST00000421295 375 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 MED13P1-201ENST00000428342 171 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 MTND5P15-201ENST00000434246 349 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 MTATP6P16-201ENST00000434543 526 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 RPL7P28-201ENST00000437739 740 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC011742.2-201ENST00000443818 352 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 SNORD127-201ENST00000458892 86 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 UBA52P3-201ENST00000491303 382 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC109481.1-201ENST00000509173 282 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 TXNP6-201ENST00000510190 310 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 RNU6-470P-201ENST00000515954 104 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC233702.7-202ENST00000582941 211 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC020916.2-201ENST00000591242 360 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC068790.3-201ENST00000602988 553 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 SUMO2P15-201ENST00000604285 278 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC211433.2-201ENST00000608433 387 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AL627230.1-201ENST00000613077 211 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 AC010615.1-201ENST00000594254 1764 ntBASIC8.38□□□□□ -1.07
PHF8Q9UPP1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC8.38□□□□□ -1.07
PHF8Q9UPP1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC024587.1-201ENST00000505925 2157 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 RNU6-200P-201ENST00000364743 107 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 Y_RNA.461-201ENST00000384263 103 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 UBE2V1P2-201ENST00000397758 440 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AL356421.1-201ENST00000403255 413 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 RN7SKP222-201ENST00000410651 315 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC048351.1-201ENST00000420064 602 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 PIGPP3-201ENST00000425307 415 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 DYNLT3P2-201ENST00000442517 295 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 OR1H1P-201ENST00000448731 937 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AL118520.1-201ENST00000450770 291 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC116562.3-201ENST00000506136 177 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC011979.2-201ENST00000527568 352 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC068587.5-201ENST00000528506 175 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 HSPE1P2-201ENST00000554777 306 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC022884.3-201ENST00000579571 248 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 SNORD39.3-201ENST00000584451 71 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC011477.5-201ENST00000586571 259 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC125232.2-201ENST00000592457 143 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms