Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 SRP72P2-201ENST00000344851 1979 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 ZNF603P-201ENST00000405613 487 ntBASIC4.18□□□□□ -1.74
SCN11AQ9UI33 ETF1P3-201ENST00000430422 1160 ntBASIC4.18□□□□□ -1.74
SCN11AQ9UI33 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 RPL7P48-201ENST00000461513 746 ntBASIC4.18□□□□□ -1.74
SCN11AQ9UI33 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 AC104984.5-201ENST00000586878 94 ntBASIC4.18□□□□□ -1.74
SCN11AQ9UI33 AL451007.1-201ENST00000595491 289 ntBASIC4.18□□□□□ -1.74
SCN11AQ9UI33 AL162574.2-201ENST00000614618 657 ntBASIC4.18□□□□□ -1.74
SCN11AQ9UI33 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN11AQ9UI33 RNA5SP126-201ENST00000365092 109 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 COTL1P1-201ENST00000422309 375 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 RPL23AP67-201ENST00000465341 474 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 RPS29P26-201ENST00000477483 171 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AC138409.2-202ENST00000507274 458 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 CYP2C60P-201ENST00000566088 139 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 UBL5P2-201ENST00000583788 219 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 SNORA80A-201ENST00000363922 136 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AC027309.2-201ENST00000520566 192 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AP000859.1-201ENST00000525536 307 ntBASIC4.17□□□□□ -1.74
SCN11AQ9UI33 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.17□□□□□ -1.74
SCN11AQ9UI33 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AC007496.3-201ENST00000624987 3443 ntBASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AC012078.1-201ENST00000405035 1646 ntBASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 SNORA48.8-201ENST00000391324 134 ntBASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 RPS26P24-201ENST00000497656 331 ntBASIC4.16□□□□□ -1.74
SCN11AQ9UI33 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AC107934.2-201ENST00000518653 310 ntBASIC4.16□□□□□ -1.74
SCN11AQ9UI33 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AC104763.2-201ENST00000604179 382 ntBASIC4.16□□□□□ -1.74
SCN11AQ9UI33 AL450472.3-201ENST00000615578 367 ntBASIC4.16□□□□□ -1.74
SCN11AQ9UI33 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN11AQ9UI33 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 MIR30E-201ENST00000362104 92 ntBASIC4.15□□□□□ -1.74
SCN11AQ9UI33 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SCN11AQ9UI33 HSPA8P17-201ENST00000427029 1382 ntBASIC4.15□□□□□ -1.75
SCN11AQ9UI33 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
SCN11AQ9UI33 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCN11AQ9UI33 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN11AQ9UI33 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN11AQ9UI33 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 RNU6-729P-201ENST00000384399 107 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC011242.1-201ENST00000433596 1158 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 RPL7L1P13-201ENST00000511702 739 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 RN7SKP116-201ENST00000516902 319 ntBASIC4.14□□□□□ -1.75
SCN11AQ9UI33 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN11AQ9UI33 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms