Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC032011.1-201ENST00000611703 1549 ntBASIC3.32□□□□□ -1.88
VPS29Q9UBQ0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
VPS29Q9UBQ0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS29Q9UBQ0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 PRO1804-201ENST00000623780 2050 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RNA5SP167-201ENST00000365461 116 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RSL24D1P1-201ENST00000404972 493 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 CYCSP19-201ENST00000411715 316 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RANP4-201ENST00000413361 655 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AL513174.1-201ENST00000423182 629 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AL445584.1-201ENST00000431451 330 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 MTCO1P52-201ENST00000433928 531 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RPS15AP29-201ENST00000445539 400 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AC073387.1-201ENST00000453261 709 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AL049830.2-201ENST00000480072 201 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 ACTR3P3-201ENST00000480448 893 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RNU1-95P-201ENST00000516357 160 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 RNU1-128P-201ENST00000516704 160 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AC107934.2-201ENST00000518653 310 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 OR4U1P-201ENST00000554958 912 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 MIR5047-201ENST00000579212 100 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 BMS1P7-201ENST00000602440 1052 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AC112230.1-201ENST00000604342 547 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AP003117.2-201ENST00000606010 545 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 AL121772.2-201ENST00000614331 297 ntBASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS29Q9UBQ0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 RNF6P1-201ENST00000444889 1784 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 RNA5SP479-201ENST00000364858 117 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL359837.1-201ENST00000381357 287 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 ELOCP6-201ENST00000429066 328 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL035246.1-201ENST00000433554 1255 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL138799.3-201ENST00000438968 350 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 PPIAP3-201ENST00000450588 505 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC097262.1-201ENST00000452559 548 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 ELOCP12-201ENST00000458706 328 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC087312.1-201ENST00000471411 480 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC005726.1-201ENST00000494679 427 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 CDH12P2-201ENST00000504393 298 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC007687.1-201ENST00000602704 304 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AC006557.5-201ENST00000603126 811 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 MTCO2P22-201ENST00000603246 681 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 AL355816.1-201ENST00000607951 118 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 ZNF285B-201ENST00000561698 1767 ntBASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS29Q9UBQ0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS29Q9UBQ0 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms