Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HPS4Q9NQG7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 MTCO1P18-201ENST00000455518 1419 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 MIR30B-201ENST00000384850 88 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 MIR200C-201ENST00000384980 68 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 MTATP6P31-201ENST00000406985 692 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AL158050.1-201ENST00000416077 457 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 ELOCP11-201ENST00000436690 332 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 ELOCP16-201ENST00000444494 332 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 RPL7L1P8-201ENST00000469911 741 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 RPL23AP71-201ENST00000470966 469 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 TRBV8-2-201ENST00000475637 270 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AL139099.1-201ENST00000497398 403 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AL035404.1-201ENST00000497982 568 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AC017037.1-201ENST00000508460 471 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 RNU7-143P-201ENST00000516781 65 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 OR4U1P-201ENST00000554958 912 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AL136520.1-202ENST00000555494 763 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AC090751.1-201ENST00000566966 267 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AC106734.1-201ENST00000568646 663 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AC012254.4-201ENST00000588843 273 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 PCNAP1-202ENST00000595299 752 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AC105429.2-201ENST00000610567 517 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 AC090246.1-201ENST00000616499 426 ntBASIC4.14□□□□□ -1.75
HPS4Q9NQG7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.14□□□□□ -1.75
HPS4Q9NQG7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AL031985.3-201ENST00000565390 2449 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC066616.2-201ENST00000559334 1481 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AL161912.2-201ENST00000565707 3007 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 RNU6-543P-201ENST00000362576 108 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 ATP5F1P6-201ENST00000402768 767 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 RNU2-6P-201ENST00000411404 190 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 ETF1P3-201ENST00000430422 1160 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 RPL23AP89-201ENST00000439324 255 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 RPL21P103-201ENST00000479921 488 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 ACTR3P3-201ENST00000480448 893 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC012531.5-201ENST00000611375 151 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC064801.1-201ENST00000612025 407 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 RMST_10.1-201ENST00000616309 154 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC095038.2-201ENST00000621464 1070 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC004777.1-201ENST00000624317 287 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 MFSD8-213ENST00000641134 1327 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HPS4Q9NQG7 AC018555.1-201ENST00000567548 1980 ntBASIC4.13□□□□□ -1.75
HPS4Q9NQG7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AP001486.2-201ENST00000561652 5113 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 ZNF33CP-201ENST00000432492 2030 ntBASIC4.12□□□□□ -1.75
HPS4Q9NQG7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.12□□□□□ -1.75
HPS4Q9NQG7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms