Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCSER1Q9C0I3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCSER1Q9C0I3 MTND5P11-201ENST00000511037 1812 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 MIR30B-201ENST00000384850 88 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC008065.1-201ENST00000428525 348 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 HMGB3P5-201ENST00000428894 612 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 ELOCP6-201ENST00000429066 328 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC122718.1-201ENST00000439448 744 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 BTBD7P2-201ENST00000441962 620 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 ARL5AP2-201ENST00000444698 533 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 HMGB1P16-201ENST00000447155 540 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 ELOCP12-201ENST00000458706 328 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 FAM133DP-201ENST00000464802 691 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 RPL21P71-201ENST00000465598 459 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC007688.1-201ENST00000475592 759 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC091959.2-201ENST00000477363 321 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC110792.2-201ENST00000510278 224 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 FTH1P9-201ENST00000513251 355 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 HSPE1P5-201ENST00000561489 272 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 LINC00557-201ENST00000563184 1279 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC087499.8-201ENST00000578406 226 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 NTAN1P1-201ENST00000603150 646 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC099669.2-201ENST00000616549 437 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AC244205.2-202ENST00000635781 342 ntBASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCSER1Q9C0I3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC024560.2-201ENST00000507981 1497 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 MIR134-201ENST00000385258 73 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 MTATP6P31-201ENST00000406985 692 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 MIR1303-201ENST00000408625 86 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 RN7SKP159-201ENST00000410657 292 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AL591419.1-201ENST00000427423 339 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 RPL7P28-201ENST00000437739 740 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 RPS29P7-201ENST00000439662 171 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AL691517.1-201ENST00000440833 1235 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 RPS7P5-201ENST00000441482 581 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 SETD6P1-201ENST00000444575 317 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 MTCO3P20-201ENST00000454926 688 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AL139099.1-201ENST00000497398 403 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC005351.1-201ENST00000511152 786 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 RN7SKP83-201ENST00000516512 178 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 NARSP2-201ENST00000518524 679 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC010306.1-201ENST00000523223 1117 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 OR5AK3P-201ENST00000527486 1297 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 MIR5685-201ENST00000579080 79 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AC069304.3-201ENST00000603938 1084 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 AL021368.1-201ENST00000607490 540 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 MIR6864-201ENST00000617935 70 ntBASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCSER1Q9C0I3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCSER1Q9C0I3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.19□□□□□ -1.74
CCSER1Q9C0I3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.19□□□□□ -1.74
CCSER1Q9C0I3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCSER1Q9C0I3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.19□□□□□ -1.74
CCSER1Q9C0I3 AC083899.2-201ENST00000423285 1376 ntBASIC4.19□□□□□ -1.74
CCSER1Q9C0I3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCSER1Q9C0I3 MTND4P21-201ENST00000453886 1357 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms