Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 AL133383.2-201ENST00000622958 2336 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM4Q9C037 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM4Q9C037 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM4Q9C037 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 U8.11-201ENST00000384699 133 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 U8.12-201ENST00000384701 133 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 RPL21P17-201ENST00000397467 475 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 HSPE1P12-201ENST00000412576 301 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 OR5BE1P-201ENST00000425977 939 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 OR4F13P-201ENST00000428478 931 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 OR6C71P-201ENST00000432580 913 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 TBCAP1-201ENST00000436520 327 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM4Q9C037 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 RPS11P1-201ENST00000451072 473 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 U8.18-201ENST00000459285 133 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM4Q9C037 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 YPEL5P3-201ENST00000547227 352 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 GTF2IP8-201ENST00000560687 584 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 AC025627.2-201ENST00000576220 160 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 AC110743.1-201ENST00000584870 478 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 AL451044.1-201ENST00000604867 238 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 OR5BE1P-202ENST00000641168 1176 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM4Q9C037 AF127577.6-201ENST00000623352 2191 ntBASIC3.76□□□□□ -1.81
TRIM4Q9C037 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM4Q9C037 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM4Q9C037 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM4Q9C037 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 AC007496.3-201ENST00000624987 3443 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM4Q9C037 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 MIR128-1-201ENST00000384921 82 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL391417.1-201ENST00000404100 426 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AC096664.2-201ENST00000411843 406 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 KCTD9P3-201ENST00000434597 1169 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL354710.1-201ENST00000453641 246 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AP000873.1-201ENST00000463987 400 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 RN7SL323P-201ENST00000494712 295 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL358832.1-201ENST00000497800 389 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM4Q9C037 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 NDUFB9P3-201ENST00000521269 501 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 OR8X1P-201ENST00000534542 869 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 MIR3922-201ENST00000585192 84 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 AC090953.1-201ENST00000604305 1092 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AL390816.3-201ENST00000604527 1066 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 MIR6868-201ENST00000611215 58 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 SNORA50A-202ENST00000629536 136 ntBASIC3.75□□□□□ -1.81
TRIM4Q9C037 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TRIM4Q9C037 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM4Q9C037 ZNF833P-201ENST00000424938 1494 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 AL161912.2-201ENST00000565707 3007 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM4Q9C037 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM4Q9C037 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM4Q9C037 Y_RNA.500-201ENST00000384466 111 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM4Q9C037 AP000907.1-201ENST00000428428 510 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 NANOGP10-201ENST00000453325 895 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 AC092691.2-201ENST00000461787 803 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 RN7SL293P-201ENST00000481765 281 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 RNU6-352P-201ENST00000516908 107 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 AC087369.1-201ENST00000520775 996 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM4Q9C037 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM4Q9C037 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM4Q9C037 MIR4716-201ENST00000579628 84 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms