Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AL161713.1-201ENST00000555538 145 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 FAM60CP-201ENST00000591086 664 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC006077.1-201ENST00000604746 343 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC092574.1-201ENST00000609771 420 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC006213.4-201ENST00000616184 634 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC112200.1-201ENST00000625015 234 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 MTND4P10-201ENST00000446199 1363 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC007823.1-201ENST00000569932 1566 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 Y_RNA.62-201ENST00000362840 99 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 SNORD46.1-201ENST00000364139 104 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 RNU6-152P-201ENST00000384037 107 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 U3.39-201ENST00000408569 239 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC093084.1-201ENST00000424233 687 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 SETD6P1-201ENST00000444575 317 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC010683.1-201ENST00000473673 378 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 GAPDHP36-201ENST00000480688 918 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 ATG10-AS1-201ENST00000504846 648 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 COL6A4P2-205ENST00000509855 506 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 RNU6-579P-201ENST00000516879 102 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 HSPE1P5-201ENST00000561489 272 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 SNORA51-201ENST00000606420 132 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 RMST_8.1-201ENST00000610287 165 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC012531.5-201ENST00000611375 151 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC104307.1-201ENST00000616142 196 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 U7.8-201ENST00000619968 63 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC004777.1-201ENST00000624317 287 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AC106730.3-201ENST00000624568 641 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 AL356094.1-201ENST00000624663 1212 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO3Q9BXY4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 RNU6-386P-201ENST00000362650 107 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 SNORD6-201ENST00000365444 73 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 MIR7-3-201ENST00000384898 110 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 MIR92A2-201ENST00000385299 75 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 RN7SKP156-201ENST00000410308 342 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 RN7SKP53-201ENST00000411337 315 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 RPS12P23-201ENST00000419579 400 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC092832.1-201ENST00000422934 400 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 RPL37P1-201ENST00000432310 284 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AL590762.3-201ENST00000436372 640 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms