Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RPS7P5-201ENST00000441482 581 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL136380.1-201ENST00000447970 162 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 TRGVB-201ENST00000453257 471 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 SNORD19B-201ENST00000459623 84 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC018638.3-201ENST00000461273 132 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RN7SL717P-201ENST00000478343 297 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RN7SL273P-201ENST00000481561 299 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RN7SL101P-201ENST00000496350 279 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC074255.1-201ENST00000511259 501 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC006499.2-201ENST00000513470 337 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNA5SP401-201ENST00000515920 127 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 HMGB1P42-201ENST00000532126 553 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC023050.3-201ENST00000541142 333 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 PDCD5P1-201ENST00000543528 309 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC079075.1-201ENST00000559543 878 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC078899.5-201ENST00000612475 178 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC125336.1-201ENST00000508893 2827 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC007996.1-201ENST00000620414 2821 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 OR5J1P-201ENST00000313544 939 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 OR9K1P-201ENST00000326513 941 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 IGKV7-3-201ENST00000357453 298 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 RNA5SP46-201ENST00000362370 120 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 RNU6-474P-201ENST00000384243 107 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 Y_RNA.579-201ENST00000390939 94 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AL034374.1-201ENST00000406329 351 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 RNU2-62P-201ENST00000410868 191 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AL357752.1-201ENST00000412817 349 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 OR1AA1P-201ENST00000419597 916 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 OR10T1P-201ENST00000424327 947 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 RPL36AP53-201ENST00000432891 316 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC096775.1-201ENST00000437724 448 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 GTF2IP13-201ENST00000438487 386 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 TRBV5-2-201ENST00000489095 273 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 RNU6-615P-201ENST00000516065 106 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 SNORD60.2-201ENST00000516883 86 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 BTF3P12-201ENST00000519620 469 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC022861.1-201ENST00000522981 663 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 IGLV3-30-201ENST00000524362 298 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AP003181.2-201ENST00000528941 181 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC099489.2-201ENST00000574976 260 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 MIR5186-201ENST00000577504 120 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 SNORD39.2-201ENST00000579995 76 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC009027.1-201ENST00000604510 479 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 BCRP9-201ENST00000605312 388 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC124303.1-201ENST00000605703 360 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 MIR6862-1-201ENST00000613016 70 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 MIR6862-2-201ENST00000614755 70 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC090607.5-201ENST00000615692 224 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 AC116158.1-201ENST00000560231 2129 ntBASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP3Q9BWW4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms